DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3156 and Abcb11

DIOPT Version :10

Sequence 1:NP_569844.2 Gene:CG3156 / 30994 FlyBaseID:FBgn0023536 Length:692 Species:Drosophila melanogaster
Sequence 2:NP_113948.1 Gene:Abcb11 / 83569 RGDID:619930 Length:1321 Species:Rattus norvegicus


Alignment Length:532 Identity:201/532 - (37%)
Similarity:297/532 - (55%) Gaps:22/532 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 GEYSVLLFGIFVLGGFANFARVHLFGNAALRIVRSLRSRLYRSMLMQEVGWFDTKGTGELINRLS 230
            |.|:.:...:.:||.|    ::.|:.....|.:|.:|...:|.::..|:||||....|||.:|.:
  Rat   143 GIYAGVGMTVLILGYF----QIRLWVITGARQIRRMRKIYFRRIMRMEIGWFDCTSVGELNSRFA 203

  Fly   231 NDTLMVGTSLSQNVSDGLR--SVAMIGVGTGMMIYTSPQLAAVSALVVPAMAGMAIVYGRYVRRI 293
            :|...:..:::..::..|:  |.||.|:..|  .|...:|..|...|.|.:...|.|.|..:.:.
  Rat   204 DDIEKINDAIADQLAHFLQRMSTAMCGLLLG--FYRGWKLTLVILAVSPLIGIGAAVIGLSIAKF 266

  Fly   294 TKVELDKYAEIMKFAEERFGNVKTVKTFCREQQEVAAFDGKLDEALQIGYKETRARAIFFG---- 354
            |::||..||:....|:|...:::||..|..|.:||..::..|..|.:.|..:......|.|    
  Rat   267 TELELKAYAKAGSIADEVLSSIRTVAAFGGENKEVERYEKNLVFAQRWGIWKGMVMGFFTGYMWC 331

  Fly   355 LTGFCGNFIIISVLYYGGTLVL-QDSLTIGALTAFMLYAGYVAISMNGLSNFYSQLNKGIGASER 418
            |..||    .....:||.|||| ::..|.|.|....|.....|:::...|:.....:.|..|:..
  Rat   332 LIFFC----YALAFWYGSTLVLDEEEYTPGTLVQIFLCVILAAMNIGHASSCLEIFSTGCSAATN 392

  Fly   419 IWEILDRECSIPIDKG-VVPLEKPVGEVGFQNVFFTFPTRPESAVLTDFSLNLMPGTTTAVVGRS 482
            |::.:||:..|....| ...|::..||:.|.||.|.:|:||:..:|.:.|:.:.||.|||:||.|
  Rat   393 IFQTIDRQPVIDCMSGDGYKLDRIKGEIEFHNVTFHYPSRPDVKILDNLSMVIKPGETTALVGSS 457

  Fly   483 GSGKTTIALLMLRLYDPQGGTVHLDGIDLRTVNPQWLRNNIGAVSQEPVLFSCSIRENILYGANP 547
            |:||:|...|:.|.|||..|.|.|||.|:|::|.:|||:.||.|.|||||||.:|.|||.:|.  
  Rat   458 GAGKSTALQLIQRFYDPCEGMVTLDGHDIRSLNIRWLRDQIGIVEQEPVLFSTTIAENIRFGR-- 520

  Fly   548 GETPSPERLQQVIEDANVSQFTDQLPDGLDTLVGQRGMMLSGGQKQRVAIARALIKNPAILILDE 612
             |..:.|.:.|..:|||...|...||...|||||:.|..:|||||||||||||||:||.||:||.
  Rat   521 -EDATMEDIVQAAKDANAYNFIMALPQQFDTLVGEGGGQMSGGQKQRVAIARALIRNPKILLLDM 584

  Fly   613 ATSALDAVSENLVQNALDNLIQGRTVLTIAHRLSTIRNADQIAVLSDGKIVEQGSYNELMGIQEG 677
            ||||||..||..||.||:.:..|.|::::||||||:|.||.|.....|..||:|::.||:. ::|
  Rat   585 ATSALDNESEARVQEALNKIQHGHTIISVAHRLSTVRAADVIIGFEHGVAVERGTHEELLE-RKG 648

  Fly   678 VFRELVASQAFG 689
            |:..||..|:.|
  Rat   649 VYFMLVTLQSQG 660

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3156NP_569844.2 MdlB 103..687 CDD:440747 199/528 (38%)
Abcb11NP_113948.1 PTZ00265 150..1314 CDD:240339 199/525 (38%)
Interaction with HAX1. /evidence=ECO:0000269|PubMed:15159385 651..674 4/10 (40%)

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