DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3156 and ABCB28

DIOPT Version :9

Sequence 1:NP_569844.2 Gene:CG3156 / 30994 FlyBaseID:FBgn0023536 Length:692 Species:Drosophila melanogaster
Sequence 2:NP_194275.2 Gene:ABCB28 / 828650 AraportID:AT4G25450 Length:714 Species:Arabidopsis thaliana


Alignment Length:724 Identity:233/724 - (32%)
Similarity:364/724 - (50%) Gaps:99/724 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 HHRTARSL------QHSLPPPNRYHSHLHPTLRMPWWC--------MRRGFAQSSKWLARNAKAN 88
            ||.:.|.|      |.|:..|   :..|.|.|.   :|        .|......|..|||.....
plant    10 HHGSTRVLVARRRCQASVLRP---YGGLKPFLS---FCSLPNSTAPFRDSLRAKSDGLARAYVTG 68

  Fly    89 LPTAVGAGIVPAP-VKMGRSQ--------YGRLLSLTKSEKWVLTAGIGCLVVSSAITMSVPLFL 144
            .|..|..   |.| ::..:|:        :|.|.||....|..|:..:..|:..|..|:|:|:|.
plant    69 APPIVEE---PDPKIEESKSEAESKDLISWGLLWSLMSKHKLRLSVCLLTLLGCSTCTLSMPVFS 130

  Fly   145 GKVIDVVFNKSGMDSAAMAKLGEYSVLLFG---IFVLGGFANFARVHLFGNAALRIVRSLRSRLY 206
            |:..:|:.   |:....:.:|.....:|:.   ||.:....|...:  :.|    ::..||::::
plant   131 GRFFEVLI---GVRPEPLWRLLSKIAVLYSLEPIFTIAFVTNMTAI--WEN----VMAILRAQIF 186

  Fly   207 RSMLMQEVGWFDTKGTGELINRLSNDTLMVGTSLSQNVS--DGLRSVAMIGVGTGMMIYT-SPQL 268
            |.:|:|:..:||....|||...|::|...:.:.::.|:|  .|.|:...: .||..:::| ||||
plant   187 RRVLIQKAEFFDKYKVGELTGLLTSDLGALNSIVNDNISRDRGFRAFTEV-FGTICILFTLSPQL 250

  Fly   269 AAVSALVVPAMAGMAIVYGRYVRRITKVELDKYAEIMKFAEERFGNVKTVKTFCREQQEVAAFDG 333
            |.|..|::.|::.:..||.|....:.|......|.:.....|.|..::||::|..|:::::.|..
plant   251 APVLGLLMLAVSVLVAVYKRSTVPVYKSHGLAQATMSDCVSETFSAIRTVRSFSGEKRQMSIFGS 315

  Fly   334 KLDEALQIGYKETRARAIFFGLTGFCGNFIIISVLYYGGTLVLQDSLTIGALTAFMLYAGYVAIS 398
            ::......|.|....::|...:|.......::::...||:.|....|.:|.:.:|:.|...:..:
plant   316 QILAYKLSGLKLGTFKSINESITRVAVYISLLALYCLGGSKVKTGELAVGTVVSFIGYTFTLTFA 380

  Fly   399 MNGLSNFYSQLNKGIGASERIWEILDRECSIPIDKGVV-PLEKPV-------------------- 442
            :.||.|.:..|.....|.:||..||:   ::.||:.:. .||:.:                    
plant   381 VQGLVNTFGDLRGTFAAIDRINSILN---AVDIDEALAYGLERDIHTKKVQDENLKLFLSAGPNV 442

  Fly   443 -------------------------GEVGFQNVFFTFPTRPESAVLTDFSLNLMPGTTTAVVGRS 482
                                     |:|...:|.|.:|.||:..||...||.|..||.||:||.|
plant   443 NIRHLDKYYMSNLKSTNNLRTLTWAGDVCLDDVHFAYPLRPDVKVLDGLSLTLNSGTVTALVGSS 507

  Fly   483 GSGKTTIALLMLRLYDPQGGTVHLDGIDLRTVNPQWLRNNIGAVSQEPVLFSCSIRENILYGANP 547
            |:||:||..|:.|.|:|..|.:.:.|.|:|..:.......:..|:|||||||.|:.|||.||. |
plant   508 GAGKSTIVQLLARFYEPTQGRITVGGEDVRMFDKSEWAKVVSIVNQEPVLFSLSVAENIAYGL-P 571

  Fly   548 GETPSPERLQQVIEDANVSQFTDQLPDGLDTLVGQRGMMLSGGQKQRVAIARALIKNPAILILDE 612
            .|..|.:.:.:..:.||...|...||.|.|||||:||.:|||||:|||||||:|:||..||||||
plant   572 NEHVSKDDIIKAAKAANAHDFIISLPQGYDTLVGERGGLLSGGQRQRVAIARSLLKNAPILILDE 636

  Fly   613 ATSALDAVSENLVQNALDNLIQGRTVLTIAHRLSTIRNADQIAVLSDGKIVEQGSYNELMGIQEG 677
            ||||||||||.|||:||:.|::.||.|.|||||||:::|:||||.|||||:|.|:::||:. |:|
plant   637 ATSALDAVSERLVQSALNRLMKDRTTLVIAHRLSTVQSANQIAVCSDGKIIELGTHSELVA-QKG 700

  Fly   678 VFRELVASQ 686
            .:..||.:|
plant   701 SYASLVGTQ 709

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3156NP_569844.2 MdlB 106..687 CDD:224055 213/641 (33%)
ABC_membrane 127..395 CDD:279056 65/273 (24%)
ABC_MTABC3_MDL1_MDL2 447..686 CDD:213216 125/238 (53%)
ABCB28NP_194275.2 MdlB 92..712 CDD:224055 212/633 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D684058at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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