DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3156 and ABCB3

DIOPT Version :9

Sequence 1:NP_569844.2 Gene:CG3156 / 30994 FlyBaseID:FBgn0023536 Length:692 Species:Drosophila melanogaster
Sequence 2:NP_192091.1 Gene:ABCB3 / 826951 AraportID:AT4G01820 Length:1229 Species:Arabidopsis thaliana


Alignment Length:591 Identity:211/591 - (35%)
Similarity:331/591 - (56%) Gaps:31/591 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 RLLSLTKSEKWVL--TAGIGCLVVSSAITMSVPLFLGKVIDVV-FNKSGMDSAAMAKLGEYSVLL 172
            :|.|.:.|...:|  ...||.:.......:...|| |.:||.: .|:|..|...:........:.
plant    12 KLFSFSDSTDVLLMIVGSIGAIGNGVGFPLMTLLF-GDLIDSIGQNQSNKDIVEIVSKVCLKFVY 75

  Fly   173 FGIFVLGGFANFARVHLFGNAALRIVRSLRSRLYRSMLMQEVGWFDTK-GTGELINRLSNDTLMV 236
            .|:..||  |.|.:|..:.....|....:||...:::|.|::|:||.: .|||::.|:|.||:::
plant    76 LGLGTLG--AAFLQVACWMITGERQAARIRSLYLKTILRQDIGFFDVETSTGEVVGRMSGDTVLI 138

  Fly   237 GTSLSQNVSDGLRSVAMIGVGTGMMIYTSPQLAAVSALV-VP--AMAGMAIVYGRYVRRITKVEL 298
            ..::.:.|...::.:|.. ||..::.:....|..:..|| :|  |:||.|:..  .|.|.:..|.
plant   139 LEAMGEKVGKFIQLIATF-VGGFVLAFVKGWLLTLVMLVSIPLLAIAGAAMPI--IVTRASSREQ 200

  Fly   299 DKYAEIMKFAEERFGNVKTVKTFCREQQEVAAFDGKLDEALQIGYKETRARAIFFGL-------T 356
            ..||:.....|:..|:::||.:|..|:|.:.::    .|.:.:.|:.:..:....||       .
plant   201 AAYAKASTVVEQTLGSIRTVASFTGEKQAMKSY----REFINLAYRASVKQGFSMGLGLGVVFFV 261

  Fly   357 GFCGNFIIISVLYYGGTLVLQDSLTIGALTAFMLYAGYVAISMNGLSNFYSQLNKGIGASERIWE 421
            .||...:.|   ::||.::|:...|.|.:...|:.....::|:...:...:....|..|:.:::|
plant   262 FFCSYALAI---WFGGEMILKKGYTGGEVVNVMVTVVASSMSLGQTTPCLTAFAAGKAAAYKMFE 323

  Fly   422 ILDRECSI-PIDKGVVPLEKPVGEVGFQNVFFTFPTRPESAVLTDFSLNLMPGTTTAVVGRSGSG 485
            .::|:.|| ..|.....||...||:..::|.|::|.||...|...|||.:..|.|.|:||.||||
plant   324 TIERKPSIDAFDLNGKVLEDIRGEIELRDVCFSYPARPMEEVFGGFSLLIPSGATAALVGESGSG 388

  Fly   486 KTTIALLMLRLYDPQGGTVHLDGIDLRTVNPQWLRNNIGAVSQEPVLFSCSIRENILYGANPGET 550
            |:::..|:.|.|||..|:|.:||::|:....:|:|..||.|||||||||.||.|||.||.   |.
plant   389 KSSVISLIERFYDPSSGSVLIDGVNLKEFQLKWIRGKIGLVSQEPVLFSSSIMENIGYGK---EN 450

  Fly   551 PSPERLQQVIEDANVSQFTDQLPDGLDTLVGQRGMMLSGGQKQRVAIARALIKNPAILILDEATS 615
            .:.|.:|...:.||.:.|.|:||.||:||||:.|..||||||||:|||||::|:|.||:||||||
plant   451 ATVEEIQAAAKLANAANFIDKLPRGLETLVGEHGTQLSGGQKQRIAIARAILKDPRILLLDEATS 515

  Fly   616 ALDAVSENLVQNALDNLIQGRTVLTIAHRLSTIRNADQIAVLSDGKIVEQGSYNELMGIQEGVFR 680
            ||||.||.:||.|||.::..||.:.:||||||:||||.|||:..|||||:||::||:...||.:.
plant   516 ALDAESERVVQEALDRVMMSRTTVIVAHRLSTVRNADMIAVIHRGKIVEEGSHSELLKDHEGAYA 580

  Fly   681 ELVASQ 686
            :|:..|
plant   581 QLIRLQ 586

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3156NP_569844.2 MdlB 106..687 CDD:224055 211/591 (36%)
ABC_membrane 127..395 CDD:279056 68/279 (24%)
ABC_MTABC3_MDL1_MDL2 447..686 CDD:213216 126/238 (53%)
ABCB3NP_192091.1 PTZ00265 4..1223 CDD:240339 211/591 (36%)
ABC_membrane 30..286 CDD:279056 66/268 (25%)
ABC_MTABC3_MDL1_MDL2 348..586 CDD:213216 126/240 (53%)
ABC_membrane 666..935 CDD:279056
ABC_MTABC3_MDL1_MDL2 984..1223 CDD:213216
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100059
Panther 1 1.100 - - O PTHR24221
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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