DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3156 and abcb11a

DIOPT Version :9

Sequence 1:NP_569844.2 Gene:CG3156 / 30994 FlyBaseID:FBgn0023536 Length:692 Species:Drosophila melanogaster
Sequence 2:XP_009303249.2 Gene:abcb11a / 797269 ZFINID:ZDB-GENE-050517-13 Length:1320 Species:Danio rerio


Alignment Length:626 Identity:221/626 - (35%)
Similarity:331/626 - (52%) Gaps:72/626 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 TKSEKWVLTAGIGCLVVSSAITMSVPLFLGKVIDVVF------------NK-------SGMDSAA 161
            |..|..::..|..|.:|..|.|..:.|..|.:.:...            ||       |.|:.:|
Zfish    48 TWREVLMMVVGSFCSLVHGAATPLMLLVYGMMTNTFVEYEVEILELTDPNKTCINNTISWMNGSA 112

  Fly   162 M---------------AKLGEYSVLLFGIFVLGGFANFARVHLFGNAALRIVRSLRSRLYRSMLM 211
            :               |::..:::...||.|.....:|.::..:.:||.|.::.:|...:|.::.
Zfish   113 VQRPDNTTIYCGVDIEAEMTNFALYYIGIGVGVLILSFFQITFWVSAAARQIQRIRKTYFRKIMC 177

  Fly   212 QEVGWFDTKGTGELINRLSNDTLMVGTSLSQNVSDGLRSVA------MIG-VG----TGMMIYTS 265
            .|:||||....|||..|:|:|...:..:::..||..:..::      |:| :|    |.::|..|
Zfish   178 MEIGWFDCNSVGELNTRMSDDINKINNAIADQVSIFIERISTFIFGFMVGFIGGWKLTLVVIAVS 242

  Fly   266 PQLAAVSALVVPAMAGMAIVYGRYVRRITKVELDKYAEIMKFAEERFGNVKTVKTFCREQQEVAA 330
            |.|...:.|:..|:|           |:|..||..||:....|:|...:::||..|..|.:|...
Zfish   243 PLLGLAAGLMAMAVA-----------RLTGRELKAYAKAGAVADEVLSSIRTVAAFGGEHKEAER 296

  Fly   331 FDGKLDEALQIGYKETRARAIFFGLTGFCGNFIIISV-LYYGGTLVLQ-DSLTIGALTAFMLYAG 393
            :|..|.:|.:.|.|:.....:|.|.. :|..|:..:: .::|..||:: ..||.|.|........
Zfish   297 YDRNLVQAQEWGIKKGMIIGVFQGYL-WCIIFLCYALAFWFGSKLVIETQELTPGGLVQVFFGVL 360

  Fly   394 YVAISMNGLSNFYSQLNKGIGASERIWEILDRECSIPI--DKGVVPLEKPVGEVGFQNVFFTFPT 456
            ..|:::...|........|..|::.|::.:|||..|..  |:|.. |:|..|::.|.:|.|.:|:
Zfish   361 IGAMNLGQASPCLEAFASGRAAAKSIFDTIDREPEIDCFSDEGHT-LDKVKGDIEFHSVNFNYPS 424

  Fly   457 RPESAVLTDFSLNLMPGTTTAVVGRSGSGKTTIALLMLRLYDPQGGTVHLDGIDLRTVNPQWLRN 521
            |||..:|.|.::.:..|.|||.||.|||||||...|:.|.|||..|.|.|||.|:|::|.||||:
Zfish   425 RPEVKILDDLNIVVKAGETTAFVGPSGSGKTTTIQLIQRFYDPSEGMVSLDGHDIRSLNIQWLRS 489

  Fly   522 NIGAVSQEPVLFSCSIRENILYGANPGETPSPERLQQVIE---DANVSQFTDQLPDGLDTLVGQR 583
            .||.|.||||||:.:|.|||.|| ..|.|     :|::||   .||...|...||...|||||:.
Zfish   490 LIGVVEQEPVLFATTIAENIRYG-RAGVT-----MQEIIEAAKQANAYNFIMSLPQTFDTLVGEG 548

  Fly   584 GMMLSGGQKQRVAIARALIKNPAILILDEATSALDAVSENLVQNALDNLIQGRTVLTIAHRLSTI 648
            |..:|||||||:||||||::||.||:||.||||||..||.:||.|||...||||.::||||||||
Zfish   549 GGQMSGGQKQRIAIARALVRNPRILLLDMATSALDNESEAVVQEALDKARQGRTTISIAHRLSTI 613

  Fly   649 RNADQIAVLSDGKIVEQGSYNELMGIQEGVFRELVASQAFG 689
            ||||.|.....|:.||:|::::|:. ::||:..||..|..|
Zfish   614 RNADVIVGFEHGRAVERGTHSQLLD-KKGVYFTLVTLQNQG 653

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3156NP_569844.2 MdlB 106..687 CDD:224055 219/622 (35%)
ABC_membrane 127..395 CDD:279056 74/314 (24%)
ABC_MTABC3_MDL1_MDL2 447..686 CDD:213216 128/241 (53%)
abcb11aXP_009303249.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100059
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.900

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