DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3156 and TAP1

DIOPT Version :10

Sequence 1:NP_569844.2 Gene:CG3156 / 30994 FlyBaseID:FBgn0023536 Length:692 Species:Drosophila melanogaster
Sequence 2:NP_000584.3 Gene:TAP1 / 6890 HGNCID:43 Length:748 Species:Homo sapiens


Alignment Length:619 Identity:202/619 - (32%)
Similarity:313/619 - (50%) Gaps:38/619 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 ANLPTA-----VGAGIVPA-------PVKMGRSQYGRLLSLTKSEKWVLTAGIGCLVVSSAITMS 139
            |.||.|     :|:..||.       ||:       |||....||...|:..:..:|:||...|:
Human   146 AALPAAALWHKLGSLWVPGGQGGSGNPVR-------RLLGCLGSETRRLSLFLVLVVLSSLGEMA 203

  Fly   140 VPLFLGKVIDVVFNKSGMDSAAMAKLGEYSVLLFGIFVLGGFANFARVHLFGNAALRIVRSLRSR 204
            :|.|.|::.|.:......|:.. ..|...|:|.....||    .|....::.|....:...|:..
Human   204 IPFFTGRLTDWILQDGSADTFT-RNLTLMSILTIASAVL----EFVGDGIYNNTMGHVHSHLQGE 263

  Fly   205 LYRSMLMQEVGWFDTKGTGELINRLSNDTLMVGTSLSQNVSDGL----RSVAMIGVGTGMMIYTS 265
            ::.::|.||..:|....||.:::|::.||..:..|||:|:|..|    |.:.::|:    |::.|
Human   264 VFGAVLRQETEFFQQNQTGNIMSRVTEDTSTLSDSLSENLSLFLWYLVRGLCLLGI----MLWGS 324

  Fly   266 PQLAAVSALVVPAMAGMAIVYGRYVRRITKVELDKYAEIMKFAEERFGNVKTVKTFCREQQEVAA 330
            ..|..|:.:.:|.:..:....|::.:.:.....:..|:..:.|.|....:.||::|..|:.|...
Human   325 VSLTMVTLITLPLLFLLPKKVGKWYQLLEVQVRESLAKSSQVAIEALSAMPTVRSFANEEGEAQK 389

  Fly   331 FDGKLDEALQIGYKETRARAIFFGLTGFCGNFIIISVLYYGGTLVLQDSLTIGALTAFMLYAGYV 395
            |..||.|...:..||..|.|:....|...|..:.:.:||.||.||...:::.|.|..|:||....
Human   390 FREKLQEIKTLNQKEAVAYAVNSWTTSISGMLLKVGILYIGGQLVTSGAVSSGNLVTFVLYQMQF 454

  Fly   396 AISMNGLSNFYSQLNKGIGASERIWEILDRECSIPIDKGVVPLEKPVGEVGFQNVFFTFPTRPES 460
            ..::..|.:.|.::.|.:|:||:|:|.|||....|....:.||... |.|.||:|.|.:|.||:.
Human   455 TQAVEVLLSIYPRVQKAVGSSEKIFEYLDRTPRCPPSGLLTPLHLE-GLVQFQDVSFAYPNRPDV 518

  Fly   461 AVLTDFSLNLMPGTTTAVVGRSGSGKTTIALLMLRLYDPQGGTVHLDGIDLRTVNPQWLRNNIGA 525
            .||...:..|.||..||:||.:||||:|:|.|:..||.|.||.:.|||..|.....::|...:.|
Human   519 LVLQGLTFTLRPGEVTALVGPNGSGKSTVAALLQNLYQPTGGQLLLDGKPLPQYEHRYLHRQVAA 583

  Fly   526 VSQEPVLFSCSIRENILYGANPGETPSPERLQQVIEDANVSQFTDQLPDGLDTLVGQRGMMLSGG 590
            |.|||.:|..|::|||.||..  :.|:.|.:......:....|...||.|.||.|.:.|..||||
Human   584 VGQEPQVFGRSLQENIAYGLT--QKPTMEEITAAAVKSGAHSFISGLPQGYDTEVDEAGSQLSGG 646

  Fly   591 QKQRVAIARALIKNPAILILDEATSALDAVSENLVQNALDNLIQ--GRTVLTIAHRLSTIRNADQ 653
            |:|.||:|||||:.|.:||||:|||||||.|:..|:..|....:  .|:||.|...||.:..||.
Human   647 QRQAVALARALIRKPCVLILDDATSALDANSQLQVEQLLYESPERYSRSVLLITQHLSLVEQADH 711

  Fly   654 IAVLSDGKIVEQGSYNELMGIQEGVFRELVASQA 687
            |..|..|.|.|.|::.:||. ::|.:..:|.:.|
Human   712 ILFLEGGAIREGGTHQQLME-KKGCYWAMVQAPA 744

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3156NP_569844.2 MdlB 103..687 CDD:440747 192/589 (33%)
TAP1NP_000584.3 3a01208 18..740 CDD:273363 200/613 (33%)
Part of the peptide-binding site. /evidence=ECO:0000269|PubMed:8955196 375..420 14/44 (32%)
Part of the peptide-binding site. /evidence=ECO:0000269|PubMed:8955196 453..487 11/33 (33%)

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