DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3156 and abcb9

DIOPT Version :10

Sequence 1:NP_569844.2 Gene:CG3156 / 30994 FlyBaseID:FBgn0023536 Length:692 Species:Drosophila melanogaster
Sequence 2:NP_001119906.1 Gene:abcb9 / 570148 ZFINID:ZDB-GENE-050517-12 Length:789 Species:Danio rerio


Alignment Length:588 Identity:220/588 - (37%)
Similarity:342/588 - (58%) Gaps:24/588 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 GRLLSLTKSEKWVLTAGIGCLVVSSAITMSVPLFLGKVIDVVFNKSGMDSAAMAKLGEYSVLLFG 174
            |||||..|.:..:|:.....|::|:.....:|.:.|:.||.:..:..||..|...: ..|||...
Zfish   182 GRLLSYCKKDSSLLSIAFFFLLLSAVCEAFIPYYTGQAIDGIVIQKSMDHFAKPMI-TLSVLALV 245

  Fly   175 IFVLGGF------ANFARVHLFGNAALRIVRSLRSRLYRSMLMQEVGWFDTKGTGELINRLSNDT 233
            ..:..||      ..|||:::          .||:.|:||::.||:|:||...||::.:||::||
Zfish   246 SSIAIGFRGGVFSVTFARLNI----------RLRNLLFRSLMHQEIGFFDANHTGDITSRLTSDT 300

  Fly   234 LMVGTSLSQNVSDGLRS-VAMIGVGTGMMIYTSPQLAAVSALVVPAMAGMAIVYGRYVRRITKVE 297
            ..|...:||||:..||| |..:|:.. .|...|.:|:.|:.:..|.:|.::.:||.|.:::||..
Zfish   301 TQVSDLISQNVNLFLRSFVKAVGIFI-FMFGMSWKLSVVTIMGFPYIAVVSKLYGEYYKKLTKEV 364

  Fly   298 LDKYAEIMKFAEERFGNVKTVKTFCREQQEVAAFDGKLDEALQIGYKETRARAIFFGLTGFCGNF 362
            ....|:..|.|||....::||::|..|.||...:..:|.|...:..|:..|.|.|...:......
Zfish   365 QTALAQANKVAEETISAMRTVRSFANEDQEGDMYYSRLQEMFVLNKKQAIAYACFMWSSYISELA 429

  Fly   363 IIISVLYYGGTLVLQDSLTIGALTAFMLYAGYVAISMNGLSNFYSQLNKGIGASERIWEILDREC 427
            :.:::|:|||.||:.:.::.|.|.:|::|...:..::..:|:.|:.|.:|:||:|:::|.:||:.
Zfish   430 LQVAILFYGGHLVVTNQMSGGTLISFVIYELELGEALESISSVYTGLMQGVGAAEKVFEYIDRKP 494

  Fly   428 SIPIDKGVVPLEKPVGEVGFQNVFFTFPTRPESAVLTDFSLNLMPGTTTAVVGRSGSGKTTIALL 492
            ...::....| |...|:|.|.||.|.:|:|||..||.:.|.:|.||..||:||.||.||::...|
Zfish   495 KHALNGQEAP-ETLEGQVEFNNVTFAYPSRPEMDVLKNVSFSLRPGQVTALVGPSGGGKSSCVCL 558

  Fly   493 MLRLYDPQGGTVHLDGIDLRTVNPQWLRNNIGAVSQEPVLFSCSIRENILYGANPGETPSPERLQ 557
            :...|.||.|.|.:||..:.|...::..:.:..|:||||||:.:::.||.||.  .|.|....::
Zfish   559 LENFYAPQQGQVLVDGRPVNTYQHKYYHSKVALVAQEPVLFARTVQMNISYGV--PEAPMEAVIR 621

  Fly   558 QVIEDANVSQFTDQLPDGLDTLVGQRGMMLSGGQKQRVAIARALIKNPAILILDEATSALDAVSE 622
            ..| :||...|...|..|.|:.||::|..||||||||||||||||::|.||||||||||||:.||
Zfish   622 AAI-NANAHDFITGLSKGYDSGVGEKGTQLSGGQKQRVAIARALIRSPRILILDEATSALDSESE 685

  Fly   623 NLVQNALDNLIQGRTVLTIAHRLSTIRNADQIAVLSDGKIVEQGSYNELMGIQEGVFRELVASQA 687
            .:||.||:||::..|||.|||||||:..||.|.|:..|.:||||.:.|||. :.|::.:||..|.
Zfish   686 YIVQQALNNLMREHTVLVIAHRLSTVERADNILVIDKGSVVEQGPHAELMA-RGGLYCKLVQRQI 749

  Fly   688 FGS 690
            .|:
Zfish   750 LGT 752

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3156NP_569844.2 MdlB 103..687 CDD:440747 218/583 (37%)
abcb9NP_001119906.1 3a01208 46..745 CDD:273363 216/579 (37%)

Return to query results.
Submit another query.