DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3156 and ABCB4

DIOPT Version :9

Sequence 1:NP_569844.2 Gene:CG3156 / 30994 FlyBaseID:FBgn0023536 Length:692 Species:Drosophila melanogaster
Sequence 2:XP_011514610.3 Gene:ABCB4 / 5244 HGNCID:45 Length:1384 Species:Homo sapiens


Alignment Length:614 Identity:224/614 - (36%)
Similarity:333/614 - (54%) Gaps:57/614 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 AVGAGIVPAPVKMGRSQYGRLLSLTKSEKWVLTAGIGCLVVSSAITMSVPLFLGKVIDVVFNKSG 156
            |.|:|:   |:.|  ..:|.:     ::|:|.|||.....|:.::::..|   ||:::....:..
Human   156 AHGSGL---PLMM--IVFGEM-----TDKFVDTAGNFSFPVNFSLSLLNP---GKILEEEMTRYA 207

  Fly   157 MDSAAMAKLGEYSVLLFGIFVLGGFANFARVHLFGNAALRIVRSLRSRLYRSMLMQEVGWFDTKG 221
            .         .||.|..|:.|    |.:.:|..:..||.|.:|.:|.:.:.::|.||:||||...
Human   208 Y---------YYSGLGAGVLV----AAYIQVSFWTLAAGRQIRKIRQKFFHAILRQEIGWFDIND 259

  Fly   222 TGELINRLSNDTLMVGTSLSQNVSDGLRSVAMIGVGTGMMIYTSPQLAAVSALVVPAMAGMAIVY 286
            |.||..||::|...:...:...|....::||....|..:......:|..|...:.|.:...|.|:
Human   260 TTELNTRLTDDISKISEGIGDKVGMFFQAVATFFAGFIVGFIRGWKLTLVIMAISPILGLSAAVW 324

  Fly   287 GRYVRRITKVELDKYAEIMKFAEERFGNVKTVKTFCREQQEVAAFDGKLDEALQIGYKETRARAI 351
            .:.:...:..||..||:....|||..|.::||..|..:.:|:..:...|:.|.:||.|:..:..|
Human   325 AKILSAFSDKELAAYAKAGAVAEEALGAIRTVIAFGGQNKELERYQKHLENAKEIGIKKAISANI 389

  Fly   352 FFGLTGFCGNFIIISVLY-----YGGTLVLQDSLTIG-ALTAFM------LYAGYVAISMNGLSN 404
            ..|:.     |::|...|     ||.|||:....||| |:|.|.      ...|..|..::..:|
Human   390 SMGIA-----FLLIYASYALAFWYGSTLVISKEYTIGNAMTVFFSILIGAFSVGQAAPCIDAFAN 449

  Fly   405 FYSQLNKGIGASERIWEILDRECSIP--IDKGVVPLEKPVGEVGFQNVFFTFPTRPESAVLTDFS 467
                   ..||:..|::|:|....|.  .::|..| :...|.:.|.:|.|::|:|....:|...:
Human   450 -------ARGAAYVIFDIIDNNPKIDSFSERGHKP-DSIKGNLEFNDVHFSYPSRANVKILKGLN 506

  Fly   468 LNLMPGTTTAVVGRSGSGKTTIALLMLRLYDPQGGTVHLDGIDLRTVNPQWLRNNIGAVSQEPVL 532
            |.:..|.|.|:||.||.||:|...|:.|||||..||:::||.|:|..|..:||..||.|||||||
Human   507 LKVQSGQTVALVGSSGCGKSTTVQLIQRLYDPDEGTINIDGQDIRNFNVNYLREIIGVVSQEPVL 571

  Fly   533 FSCSIRENILYGANPGETPSPERLQQVIEDANVSQFTDQLPDGLDTLVGQRGMMLSGGQKQRVAI 597
            ||.:|.|||.||..   ..:.:.:::.:::||..:|..:||...|||||:||..||||||||:||
Human   572 FSTTIAENICYGRG---NVTMDEIKKAVKEANAYEFIMKLPQKFDTLVGERGAQLSGGQKQRIAI 633

  Fly   598 ARALIKNPAILILDEATSALDAVSENLVQNALDNLIQGRTVLTIAHRLSTIRNADQIAVLSDGKI 662
            ||||::||.||:|||||||||..||..||.|||...:|||.:.|||||||:||||.||...||.|
Human   634 ARALVRNPKILLLDEATSALDTESEAEVQAALDKAREGRTTIVIAHRLSTVRNADVIAGFEDGVI 698

  Fly   663 VEQGSYNELMGIQEGVFRELVASQAFGSR 691
            |||||::|||. :|||:.:||..|..||:
Human   699 VEQGSHSELMK-KEGVYFKLVNMQTSGSQ 726

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3156NP_569844.2 MdlB 106..687 CDD:224055 216/594 (36%)
ABC_membrane 127..395 CDD:279056 72/279 (26%)
ABC_MTABC3_MDL1_MDL2 447..686 CDD:213216 127/238 (53%)
ABCB4XP_011514610.3 AAA 108..1369 CDD:333001 224/614 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100059
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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