DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3156 and Hmt-1

DIOPT Version :10

Sequence 1:NP_569844.2 Gene:CG3156 / 30994 FlyBaseID:FBgn0023536 Length:692 Species:Drosophila melanogaster
Sequence 2:NP_650503.1 Gene:Hmt-1 / 41925 FlyBaseID:FBgn0038376 Length:866 Species:Drosophila melanogaster


Alignment Length:608 Identity:181/608 - (29%)
Similarity:287/608 - (47%) Gaps:71/608 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 AGIGCLVVSSAITMSVPLFLGKVIDV---VFNKSGMDSAAMAKL---GEYSVLLFGI-FVLG--- 179
            |.|.|:::         |..|:||.:   ::.|..:||..:|.:   .::.::...: |:.|   
  Fly   250 AVIVCIIL---------LLAGRVIKLFLPIYRKKLVDSLTIAPIVFRWDFVLIYVALSFLQGGGT 305

  Fly   180 ---GFANFARVHLFGNAALRIVRSLRSRLYRSMLMQEVGWFDTKGTGELINRLSNDTLMVGT--- 238
               |..|..|..|:........|.:...|:|.:....:.|...:.|||::..:...|..:..   
  Fly   306 GSMGLFNNLRTFLWIRVQQYTTREIEIELFRHLHQLSLRWHLQRKTGEVLRVMDRGTDSINNLLN 370

  Fly   239 ----SLSQNVSDGLRSVAMIGVG----TGMMIYTSPQLAAVSALVVPAMAGMAIVYGRYVRRITK 295
                |::..:.|.|.:||.....    .|::::.:..|...|.:.:....      .:|.||:..
  Fly   371 YIVFSIAPTILDLLVAVAYFVYAFNWWFGLIVFLTMFLYIASTIAITEWR------TKYQRRMNL 429

  Fly   296 VELDKYAEIMKFAEERFGNVKTVKTFCREQQEVAAFDGKLDEALQIGYKETRARAIFFGLTGFCG 360
            .:.::.|.    :.:...|.:|||.:..|..||..:    .||:....||.....:...:.....
  Fly   430 ADNEQRAR----SVDSLLNFETVKYYGAEHYEVDCY----REAILKYQKEEFLSMLTLNMLNTAQ 486

  Fly   361 NFIIISVLYYGGTL-----VLQDSLTIGALTAFMLYAGYVAISMNGLSNFYSQLNKGIGASERIW 420
            |.|:...|..|..|     |...:||:|....|..|...:.:.:|....:|..:.|.....|.::
  Fly   487 NIILCLGLLAGSLLCVYLVVHHQTLTVGDFVLFSTYLMELYMPLNWFGTYYRAIQKNFVDMENMF 551

  Fly   421 EILDRECSIPIDKGVVPLEKPVGEVGFQNVFFTFPTRPESAVLTDFSLNLMPGTTTAVVGRSGSG 485
            ::|..|..|....|..||....|.:.|.||  ||...||..||.:.|..:..|.|.|:||.||:|
  Fly   552 DLLKEEEEIVDAPGCSPLLTAGGGIEFSNV--TFGYSPEKIVLRNVSFTVPAGKTVAIVGPSGAG 614

  Fly   486 KTTIALLMLRLYDPQGGTVHLDGIDLRTVNPQWLRNNIGAVSQEPVLFSCSIRENILY---GANP 547
            |:||..|:.|.||.|.|.:.:||.:::.|..|.||..||.|.|:.|||:.:|..||.|   ||  
  Fly   615 KSTIMRLLFRFYDVQTGAILIDGQNIKLVQQQSLRKAIGVVPQDTVLFNNTIFYNIEYAKLGA-- 677

  Fly   548 GETPSPERLQQVIEDANVSQFTDQLPDGLDTLVGQRGMMLSGGQKQRVAIARALIKNPAILILDE 612
                |.|.:.:....|::.:.....|:..:|.||:||:.||||:||||||||.|:|.|.|::|||
  Fly   678 ----SDEAVYEAARAADIHERILGFPEKYETKVGERGLRLSGGEKQRVAIARTLLKAPIIVLLDE 738

  Fly   613 ATSALDAVSENLVQNALDNLIQGRTVLTIAHRLSTIRNADQIAVLSDGKIVEQGSYNELMGIQEG 677
            ||||||..:|..:|.||..:...||.:.:|||||||.:||:|.||..|.|.|:|.:.||:..::|
  Fly   739 ATSALDTHTERNIQAALARVCANRTTIIVAHRLSTIIHADEILVLQQGSIAERGRHEELVLREDG 803

  Fly   678 VF--------RELVASQAFGSRN 692
            ::        :.|.|.|:.||.|
  Fly   804 IYADMWQQQLKNLDAEQSGGSDN 826

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3156NP_569844.2 MdlB 103..687 CDD:440747 177/601 (29%)
Hmt-1NP_650503.1 MTABC_N 3..241 CDD:465049
ATM1 222..821 CDD:444078 177/601 (29%)
Blue background indicates that the domain is not in the aligned region.

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