DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3156 and Mdr65

DIOPT Version :9

Sequence 1:NP_569844.2 Gene:CG3156 / 30994 FlyBaseID:FBgn0023536 Length:692 Species:Drosophila melanogaster
Sequence 2:NP_476831.1 Gene:Mdr65 / 38726 FlyBaseID:FBgn0004513 Length:1302 Species:Drosophila melanogaster


Alignment Length:603 Identity:199/603 - (33%)
Similarity:304/603 - (50%) Gaps:46/603 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 YGRLLSLTKSEKWVLTAGIGCLVVSSAITMSVPLFLGKVIDVVFNKSGMDSAAMAK------LGE 167
            :.|:|.|.|.| |       |.::...|:.....||.....|:|   |...||:|:      |..
  Fly   718 FSRILQLAKQE-W-------CYLILGTISAVAVGFLYPAFAVIF---GEFYAALAEKDPEDALRR 771

  Fly   168 YSVL---LFGIFVLGGFANFARVHLFGNAALRIVRSLRSRLYRSMLMQEVGWFD--TKGTGELIN 227
            .:||   ..|:..|.|...|.:.:||..|.:.:...:|:..:.:|:.|||||||  ....|.|..
  Fly   772 TAVLSWACLGLAFLTGLVCFLQTYLFNYAGIWLTTRMRAMTFNAMVNQEVGWFDDENNSVGALSA 836

  Fly   228 RLSNDTLMVGTSLSQNVSDGLRSVAMIGVGTGMMIYTSPQLAAVSALVVPAMAGMAIVYGRYVRR 292
            |||.:.:.:..::...:|..:::::.......:.:|.:.:||.:.....|.:.|..|:..:.:..
  Fly   837 RLSGEAVDIQGAIGYPLSGMIQALSNFISSVSVAMYYNWKLALLCLANCPIIVGSVILEAKMMSN 901

  Fly   293 ITKVELDKYAEIMKFAEERFGNVKTVKTFCREQQEVAAFDGKLDEALQIGYKETRARAIFFGLTG 357
            ....|.....|..:.|.|...|::||....||...:..:..::.....:..::.|.|.:......
  Fly   902 AVVREKQVIEEACRIATESITNIRTVAGLRREADVIREYTEEIQRVEVLIRQKLRWRGVLNSTMQ 966

  Fly   358 FCGNFIIISVLYYGGTLV------LQDSLTIG--ALTAFMLYAGYVAISMNGLSNFYSQLNKGIG 414
            ....|.....|.|||.||      .||.:.:.  .|...|:.|..:|        |....:..:.
  Fly   967 ASAFFAYAVALCYGGVLVSEGQLPFQDIIKVSETLLYGSMMLAQSLA--------FTPAFSAALI 1023

  Fly   415 ASERIWEILDRECSIPIDKGVV--PLEKPVG---EVGFQNVFFTFPTRPESAVLTDFSLNLMPGT 474
            |..|:::||||:..|....|.:  .|.|.:.   .|.::.:.|.:||||::.:|....|.::.|.
  Fly  1024 AGHRLFQILDRKPKIQSPMGTIKNTLAKQLNLFEGVRYRGIQFRYPTRPDAKILNGLDLEVLKGQ 1088

  Fly   475 TTAVVGRSGSGKTTIALLMLRLYDPQGGTVHLDGIDLR-TVNPQWLRNNIGAVSQEPVLFSCSIR 538
            |.|:||.||.||:|...|:.|.|||..||:|:|..|:: .:....:|..:|.|||||.||..||.
  Fly  1089 TVALVGHSGCGKSTCVQLLQRYYDPDEGTIHIDHDDIQHDLTLDGVRTKLGIVSQEPTLFERSIA 1153

  Fly   539 ENILYGANPGETPSPERLQQVIEDANVSQFTDQLPDGLDTLVGQRGMMLSGGQKQRVAIARALIK 603
            |||.||.| ..:.|...:....:.||...|...||:|.||.:|.||..||||||||:||||||::
  Fly  1154 ENIAYGDN-RRSVSMVEIIAAAKSANAHSFIISLPNGYDTRMGARGTQLSGGQKQRIAIARALVR 1217

  Fly   604 NPAILILDEATSALDAVSENLVQNALDNLIQGRTVLTIAHRLSTIRNADQIAVLSDGKIVEQGSY 668
            ||.||:|||||||||..||.|||.|||....|||.:.|||||||::|||.|.|:.:|::||||::
  Fly  1218 NPKILLLDEATSALDLQSEQLVQQALDTACSGRTCIVIAHRLSTVQNADVICVIQNGQVVEQGNH 1282

  Fly   669 NELMGIQEGVFRELVASQ 686
            .:|:. |.|::.:|..:|
  Fly  1283 MQLIS-QGGIYAKLHKTQ 1299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3156NP_569844.2 MdlB 106..687 CDD:224055 199/603 (33%)
ABC_membrane 127..395 CDD:279056 64/286 (22%)
ABC_MTABC3_MDL1_MDL2 447..686 CDD:213216 115/239 (48%)
Mdr65NP_476831.1 PTZ00265 91..1300 CDD:240339 199/603 (33%)
ABC_membrane 108..354 CDD:279056
ABC_MTABC3_MDL1_MDL2 405..642 CDD:213216
ABC_membrane 736..1006 CDD:279056 61/272 (22%)
ABC_MTABC3_MDL1_MDL2 1059..1299 CDD:213216 116/241 (48%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 140 1.000 Domainoid score I220
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100059
Panther 1 1.100 - - P PTHR24221
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.910

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