DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3156 and ABCB7

DIOPT Version :9

Sequence 1:NP_569844.2 Gene:CG3156 / 30994 FlyBaseID:FBgn0023536 Length:692 Species:Drosophila melanogaster
Sequence 2:NP_728642.2 Gene:ABCB7 / 38193 FlyBaseID:FBgn0035244 Length:743 Species:Drosophila melanogaster


Alignment Length:765 Identity:204/765 - (26%)
Similarity:328/765 - (42%) Gaps:142/765 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LRVRKSSQIRLSTSYNHHLGR--CL-------HHRTARSLQHSLPPPNRYHS------HLHPTLR 64
            |.:.|...|.|..    ||||  |.       .|..||.|..||...:..:|      .:.|...
  Fly     5 LHLTKQCSIHLPA----HLGRAKCYTLAKGPGTHVQARVLYSSLTKVDDKNSSDAKRKKITPFTP 65

  Fly    65 MPWWCMRRGFAQSSKWL----ARNAKANLPTA---------------------------VGAGIV 98
            .|          .||.|    .:.||...|.|                           :|.|  
  Fly    66 TP----------GSKLLGGVFGKKAKGGAPAAAAAKTTTLQRQRPYRPQQQQSRLCHVHIGGG-- 118

  Fly    99 PAPVKMGRSQYGRLLSLTKSEKWVLTA-------------------GIGCLVVSSAITMSVPLFL 144
                ..|.|..|:|.:...:.|.:|.|                   .:|.|..|..:|:.||...
  Fly   119 ----SDGGSGLGKLDAPEVTSKDMLRAMMAYIWPKEDPLVRKRVGISLGLLAGSKLLTVCVPFLF 179

  Fly   145 GKVIDVVFNKSGMDSAAMAKLGEYSVLLFGIFV----LGGFANFARVHLFGNAALRIVRSLRSRL 205
            ...:|.: ....||:|..|.|...:.|:.|..:    ..|| |..|..:|...|...:|.:.|.:
  Fly   180 KGAVDTM-TTLNMDTAPDAVLSAATALMLGYGIARASAAGF-NELRNAVFAKVAHHSIRKIASNV 242

  Fly   206 YRSMLMQEVGWFDTKGTGELINRLSNDTLMVGTSLSQNVSDGLRSVAMIGVGTGMMIY----TSP 266
            :..:...::.:...|.||               :||:.:..|.|.:..:   ...|::    |..
  Fly   243 FLHLHNLDLAFHLNKQTG---------------ALSKTIDRGSRGINFV---LSAMVFNIVPTIF 289

  Fly   267 QLAAVSALVVP----AMAGMAI----VYGRYVRRITKVELDKYAEIMKFAEERFG--------NV 315
            :||.||:::..    |.||:::    :|..|...:|:.. .::...|..||...|        |.
  Fly   290 ELALVSSILGVKCGLAFAGVSMGCVGIYAAYTLSVTQWR-TQFRVFMNQAENEAGNKAVDSLINY 353

  Fly   316 KTVKTFCREQQEVAAFDGKLDEALQIGYKETRARAIF-FGLTG-FCGNFIIISVLYYGGTLVLQD 378
            :|||.|..|:.|...::..|.:......|.:.:.|:. ||... |.....:|.||  ....:.|.
  Fly   354 ETVKYFNNEKYEAGCYNEVLKKYEAASLKTSSSLALLNFGQNAIFSSALSLIMVL--AAKEIAQG 416

  Fly   379 SLTIGALTAFMLYAGYVAISMNGLSNFYSQLNKGIGASERIWEILDRECSIPIDKGVVPL--EKP 441
            ::|:|.|.........::|.:..|.:.|.::.:.:.....::.:::.:.||.......||  :..
  Fly   417 NMTVGDLVMVNALLFQLSIPLGFLGSVYREVRQALLDMRAMFTLMNVDSSIQTAANAQPLFVDTT 481

  Fly   442 VGEVGFQNVFFTFPTRPESAVLTDFSLNLMPGTTTAVVGRSGSGKTTIALLMLRLYDPQGGTVHL 506
            ...:.|:||.|.:  .|...:..|.|..:..|...|:||.|||||:::..|:.|.::|..|.|.:
  Fly   482 NSSIEFRNVSFEY--EPGKPIFRDLSFTIPAGKNVAIVGGSGSGKSSMVRLLFRFFEPNSGKVLI 544

  Fly   507 DGIDLRTVNPQWLRNNIGAVSQEPVLFSCSIRENILYGANPGETPSPERLQQVIEDANVSQFTDQ 571
            .|.|:..|:.:.||..|..|.|:.|||..:|..||.||   ..:.|...:|.....|::......
  Fly   545 GGQDISAVDLESLRKVIAVVPQDSVLFHNTIEHNIHYG---NLSKSHAEVQNAARMADLHDSIMS 606

  Fly   572 LPDGLDTLVGQRGMMLSGGQKQRVAIARALIKNPAILILDEATSALDAVSENLVQNALDNLIQGR 636
            .|....|.||:||:.||||:|||||||||::||..|||.|||||:||:::|:.:..||.....||
  Fly   607 WPGQYSTQVGERGLKLSGGEKQRVAIARAILKNTPILIFDEATSSLDSITEHNILQALTRATSGR 671

  Fly   637 TVLTIAHRLSTIRNADQIAVLSDGKIVEQGSYNELMGIQEGVFRELVASQ 686
            |.:.|||||||:::||:|.||.:|::.|:|:::||:. |.|::..|..:|
  Fly   672 TSICIAHRLSTVKDADEILVLENGRVGERGTHSELLR-QNGLYARLWETQ 720

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3156NP_569844.2 MdlB 106..687 CDD:224055 176/628 (28%)
ABC_membrane 127..395 CDD:279056 65/293 (22%)
ABC_MTABC3_MDL1_MDL2 447..686 CDD:213216 97/238 (41%)
ABCB7NP_728642.2 ABC_membrane 164..437 CDD:294371 65/295 (22%)
ATM1 222..717 CDD:227590 151/521 (29%)
P-loop_NTPase 485..720 CDD:304359 97/240 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45458102
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24221
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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