DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3156 and tap2a

DIOPT Version :9

Sequence 1:NP_569844.2 Gene:CG3156 / 30994 FlyBaseID:FBgn0023536 Length:692 Species:Drosophila melanogaster
Sequence 2:NP_001006594.1 Gene:tap2a / 368771 ZFINID:ZDB-GENE-030616-245 Length:725 Species:Danio rerio


Alignment Length:564 Identity:199/564 - (35%)
Similarity:323/564 - (57%) Gaps:14/564 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 RLLSLTKSEKWVLTAGIGCLVVSSAITMSVPLFLGKVIDVVFNKSGMDSAAMAKLGEYSVLLFGI 175
            |::.|.:.:..:|......|.::....|.:||:.|:|||::.:....|:...|      ::..|:
Zfish   141 RVIRLYRPDYILLFGAFVFLALAVLCEMFIPLYTGEVIDILGSHYQWDNFRSA------IIFMGL 199

  Fly   176 FVLG-GFANFARVHLFGNAALRIVRSLRSRLYRSMLMQEVGWFDTKGTGELINRLSNDTLMVGTS 239
            |.|| .|:...|..||..|.......::.:|:.|::.|::|:|:|..||::.:|||.||.::|.:
Zfish   200 FSLGSSFSAGCRGGLFMCAINSFTCRVKVQLFGSLIRQDIGFFETIKTGDITSRLSTDTTLMGRA 264

  Fly   240 LSQNVSDGLRS-VAMIGVGTGMMIYTSPQLAAVSALVVPAMAGMAIVYGRYVRRITKVELDKYAE 303
            ::.||:..||: |..:|: ..:|:..|.:|..:..:..|....:..:|..:.::::|...|..|:
Zfish   265 VALNVNVLLRTLVKTLGM-LYLMVSLSWKLTLLMLMETPLTGLLQNIYDTHYQKLSKEVQDSMAQ 328

  Fly   304 IMKFAEERFGNVKTVKTFCREQQEVAAFDGKLDEALQIGYKETRARAIFFGLTGFCGNFIIISVL 368
            ....|.|....::|||:|..|..|...:||:|.|...:..:....|||:..:.......:.:::|
Zfish   329 ANDAAGEAVSGIRTVKSFKTELGEAHRYDGRLMETHNLKTRRDTVRAIYLLIRRMTELGMKVAML 393

  Fly   369 YYGGTLVLQDSLTIGALTAFMLYAGYVAISMNGLSNFYSQLNKGIGASERIWEILDRECSIPIDK 433
            |||...:....::.|.|.:|:||...:..::..|...:..:...:||:.:::|..||:..:.||.
Zfish   394 YYGRLFIQYGQMSTGNLVSFILYQQDLGDNIRTLIYIFGDMLNSVGAAGKVFEYQDRKSEVSIDG 458

  Fly   434 GVVPLEKPVGEVGFQNVFFTFPTRPESAVLTDFSLNLMPGTTTAVVGRSGSGKTTIALLMLRLYD 498
            .::|.:.. |.|.||.:.|::|.||:..||.||||.|.||..||:||.||.||:|...|:.|.|.
Zfish   459 NLMPKDLK-GHVKFQKLTFSYPRRPDHNVLKDFSLELKPGQITALVGMSGGGKSTCVSLLERFYQ 522

  Fly   499 PQGGTVHLDGIDLRTVNPQWLRNNIGAVSQEPVLFSCSIRENILYGANPGETPSPERLQQVIEDA 563
            ||.||:.|||..|:....::|.:.:..|.|||||||.::|:||.||.   :..|.||:::....|
Zfish   523 PQQGTILLDGKPLQDYQHKYLHSKVAMVGQEPVLFSGTVRDNIAYGL---QGCSMERVKEAASKA 584

  Fly   564 NVSQFTDQLPDGLDTLVGQRGMMLSGGQKQRVAIARALIKNPAILILDEATSALDAVSENLVQNA 628
            |...|..:|..|.||.||:||.:||||:|||:|||||||:.|.:|||||.||:||..||.:||.|
Zfish   585 NAHSFISKLEKGYDTDVGERGNLLSGGEKQRIAIARALIREPQVLILDEVTSSLDTESEQMVQQA 649

  Fly   629 LDNLIQGRTVLTIAHRLSTIRNADQIAVLSDGKIVEQGSYNELM 672
            | :....:|:|.|||||.||..||||.|:..|::||:|::.|||
Zfish   650 L-SCCPTQTLLVIAHRLKTIERADQIVVIDSGELVEKGTHEELM 692

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3156NP_569844.2 MdlB 106..687 CDD:224055 199/564 (35%)
ABC_membrane 127..395 CDD:279056 71/269 (26%)
ABC_MTABC3_MDL1_MDL2 447..686 CDD:213216 114/226 (50%)
tap2aNP_001006594.1 MdlB 136..708 CDD:224055 199/564 (35%)
ABC_membrane 157..417 CDD:279056 70/266 (26%)
ABCC_TAP 458..682 CDD:213215 111/228 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0058
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D684058at2759
OrthoFinder 1 1.000 - - FOG0000243
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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