DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3156 and Abcb8

DIOPT Version :9

Sequence 1:NP_569844.2 Gene:CG3156 / 30994 FlyBaseID:FBgn0023536 Length:692 Species:Drosophila melanogaster
Sequence 2:NP_001007797.1 Gene:Abcb8 / 362302 RGDID:1307655 Length:714 Species:Rattus norvegicus


Alignment Length:673 Identity:242/673 - (35%)
Similarity:374/673 - (55%) Gaps:74/673 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 CMRRGFAQSSKWLARNAKANLPTAV--------------GAGIVPAPVKMGRSQYGR--LLSLTK 117
            |:.|..||    |....:|:||.:.              |..:|||.:    .|:.|  |::|.:
  Rat    41 CLLRAVAQ----LRSQLRAHLPRSPPASHRSTSAWCWVGGTLVVPAVL----WQHPRFCLIALCE 97

  Fly   118 SE---------------KW----------VLTAGIGCLVVSSA--ITMSVPLFLGKVIDVV--FN 153
            ::               ||          :|..|:..::...|  :.:.:||.||:::::|  :.
  Rat    98 AKGSPPAQPTRARELRFKWKLFWHFLHPHLLALGLAIVLALGAALVNVQIPLLLGQLVEIVAKYT 162

  Fly   154 KSGMDS--AAMAKLGEYSVLLFGIFVLGGFANFARVHLFGNAALRIVRSLRSRLYRSMLMQEVGW 216
            :..:.|  :...:|....:||:|:   .|...|..:.|..:...|:...:|..|:.|:|.|::.:
  Rat   163 REHVGSFVSESRRLSIQLLLLYGV---QGLLTFGYLVLLSHMGERMAMDMRKALFSSLLRQDIAF 224

  Fly   217 FDTKGTGELINRLSNDTLMVGTSLSQNVSDGLRSVAMIGVGTGMMI-YTSPQLAAVSALVVPAMA 280
            ||.|.||:|::||:.|.....:|....:|.||||...: :|:.|.: ..||:|..:.|:|.||:.
  Rat   225 FDAKKTGQLVSRLTTDVQEFKSSFKLVISQGLRSSTQV-IGSLMTLSILSPRLTLMLAVVTPALM 288

  Fly   281 GMAIVYGRYVRRITKVELDKYAEIMKFAEERFGNVKTVKTFCREQQEVAAFDGKLD----EALQI 341
            |:..:.|..:|::::...::.|.....|:|..|:|:||:.|..|::|...:..:|:    :|.::
  Rat   289 GVGTLMGSGLRKLSRQCQEQIARATGVADEALGSVRTVRAFAMEKREEERYQAELESCCCKAEEL 353

  Fly   342 GYKETRARAIFFGLTGFCGNFIIISVLYYGGTLVLQDSLTIGALTAFMLYAGYVAISMNGLSNFY 406
            |    |..|:|.||:....|.:::..|:.||:||....|..|.|.:|::.:..|..||..||..:
  Rat   354 G----RGIALFQGLSNIAFNCMVLGTLFIGGSLVAGQQLKGGDLMSFLVASQTVQRSMASLSVLF 414

  Fly   407 SQLNKGIGASERIWEILDRECSIPIDKGV-VPLEKPVGEVGFQNVFFTFPTRPESAVLTDFSLNL 470
            .|:.:|:.|..|::|.:.....||:..|. :|.:...|.:.||||.|::|.||...||.:|:|.|
  Rat   415 GQVVRGLSAGARVFEYMSLSPVIPLTGGYSIPSKDLRGSITFQNVSFSYPCRPGFNVLKNFTLKL 479

  Fly   471 MPGTTTAVVGRSGSGKTTIALLMLRLYDPQGGTVHLDGIDLRTVNPQWLRNN-IGAVSQEPVLFS 534
            .||...|:||:||.||||:|.|:.|.|||..|.|.|||.||||::|.|||.. ||.:|||||||:
  Rat   480 PPGKIVALVGQSGGGKTTVASLLERFYDPTAGVVTLDGHDLRTLDPSWLRGQVIGFISQEPVLFA 544

  Fly   535 CSIRENILYGANPGETPSPERLQQVIEDANVSQFTDQLPDGLDTLVGQRGMMLSGGQKQRVAIAR 599
            .:|.|||.:|....   |.|.:......||..:|....|||..|:||:||..||||||||:||||
  Rat   545 TTIMENIRFGKLDA---SDEEVYTAARKANAHEFISSFPDGYSTVVGERGTTLSGGQKQRLAIAR 606

  Fly   600 ALIKNPAILILDEATSALDAVSENLVQNALDNLIQGRTVLTIAHRLSTIRNADQIAVLSDGKIVE 664
            ||||.|.:||||||||||||.||.:||.|||....|||||.|||||||:|.|..|.|:::|::.|
  Rat   607 ALIKRPTVLILDEATSALDAESERIVQEALDRASAGRTVLVIAHRLSTVRAAHSIIVMANGQVCE 671

  Fly   665 QGSYNELMGIQEGVFRELVASQA 687
            .|::.||:. :.|::.||:..||
  Rat   672 AGTHEELLQ-KGGLYAELIRRQA 693

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3156NP_569844.2 MdlB 106..687 CDD:224055 228/620 (37%)
ABC_membrane 127..395 CDD:279056 75/278 (27%)
ABC_MTABC3_MDL1_MDL2 447..686 CDD:213216 130/239 (54%)
Abcb8NP_001007797.1 MdlB 116..695 CDD:224055 225/590 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 82 1.000 Domainoid score I8224
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54509
OrthoDB 1 1.010 - - D221577at33208
OrthoFinder 1 1.000 - - FOG0000243
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100059
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.830

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