DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3156 and Abcb10

DIOPT Version :9

Sequence 1:NP_569844.2 Gene:CG3156 / 30994 FlyBaseID:FBgn0023536 Length:692 Species:Drosophila melanogaster
Sequence 2:NP_001012166.1 Gene:Abcb10 / 361439 RGDID:1311222 Length:715 Species:Rattus norvegicus


Alignment Length:666 Identity:311/666 - (46%)
Similarity:434/666 - (65%) Gaps:32/666 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 PPPNRYHSHLH---PTLRMP-----------WWCMRRGFAQSSKWLARNAK------ANLPTAVG 94
            |....:.|.:|   |.||.|           .|....|..:.  |:....:      |.|..|..
  Rat    38 PLVRAWTSLIHEPSPGLRFPVPLSGLPGGVGRWATSSGIRRC--WVLAGPRAAHPLFARLQGAAA 100

  Fly    95 AGI-------VPAPVKMGRSQYGRLLSLTKSEKWVLTAGIGCLVVSSAITMSVPLFLGKVIDVVF 152
            .|:       ...|...|||:..:||.|.:.|:..|:|.:|.|.|||.||||.|.||||:|||::
  Rat   101 TGVRDLGNDSQRRPATTGRSEVWKLLGLVRPERGRLSAAVGFLAVSSVITMSAPFFLGKIIDVIY 165

  Fly   153 NKSGMDSAAMAKLGEYSVLLFGIFVLGGFANFARVHLFGNAALRIVRSLRSRLYRSMLMQEVGWF 217
            .....|..  ..|......|..:|:.|..||..||:|..::...||..||:.|:.|:|.|||.:|
  Rat   166 TNPTEDFG--DSLTRLCAGLTCVFLCGAAANSIRVYLMQSSGQSIVNRLRTSLFSSILRQEVAFF 228

  Fly   218 DTKGTGELINRLSNDTLMVGTSLSQNVSDGLRSVAMIGVGTGMMIYTSPQLAAVSALVVPAMAGM 282
            |...|||||||||:||.::|.|:::|:|||||:||...||.|||.:.||.||.....|||.::.:
  Rat   229 DKTRTGELINRLSSDTALLGHSVTENLSDGLRAVAQASVGVGMMFFVSPSLATFVLSVVPPISVL 293

  Fly   283 AIVYGRYVRRITKVELDKYAEIMKFAEERFGNVKTVKTFCREQQEVAAFDGKLDEALQIGYKETR 347
            |::||||:|:::|...|..||..:.||||.||::|::.|.:|..||..:..::|:.||:..||..
  Rat   294 AVIYGRYLRKLSKATQDSLAEATQLAEERIGNIRTIRAFGKEMTEVEKYTSRVDQLLQLARKEAL 358

  Fly   348 ARAIFFGLTGFCGNFIIISVLYYGGTLVLQDSLTIGALTAFMLYAGYVAISMNGLSNFYSQLNKG 412
            |||.|||..|..||.|::||||.||.|:....:|:|.|::|::||.:|.:|:.|||:|||||.||
  Rat   359 ARAGFFGAAGLSGNLIVLSVLYKGGLLLGSTHMTVGELSSFLMYAFWVGLSIGGLSSFYSQLMKG 423

  Fly   413 IGASERIWEILDRECSIPIDKGVVPLEKPV-GEVGFQNVFFTFPTRPESAVLTDFSLNLMPGTTT 476
            :||..|:||:|:|:..:|.::|:|..||.. |.:.|:||.||:|.|||.:|..||||::..|:.|
  Rat   424 LGAGGRLWELLERQPRLPFNEGIVLDEKTFQGALEFRNVHFTYPARPEVSVFQDFSLSIPSGSVT 488

  Fly   477 AVVGRSGSGKTTIALLMLRLYDPQGGTVHLDGIDLRTVNPQWLRNNIGAVSQEPVLFSCSIRENI 541
            |:||.|||||:|:..|:||||||..|||.|||.|:|.:||.|||:.||.|||||||||||:.|||
  Rat   489 ALVGPSGSGKSTVVSLLLRLYDPSSGTVSLDGHDIRQLNPVWLRSKIGTVSQEPVLFSCSVAENI 553

  Fly   542 LYGANPGETPSPERLQQVIEDANVSQFTDQLPDGLDTLVGQRGMMLSGGQKQRVAIARALIKNPA 606
            .|||:...:.:..::::..|.||.::|....|.|.||:||::|::||||||||:||||||:|||.
  Rat   554 AYGADNLSSVTARQVERAAEVANAAEFIRSFPQGFDTVVGEKGVLLSGGQKQRIAIARALLKNPK 618

  Fly   607 ILILDEATSALDAVSENLVQNALDNLIQGRTVLTIAHRLSTIRNADQIAVLSDGKIVEQGSYNEL 671
            ||:||||||||||.:|:|||.|||.|::|||||.||||||||:||:.:|||:.|||.|.|::.||
  Rat   619 ILLLDEATSALDAENEHLVQEALDRLMEGRTVLIIAHRLSTIKNANFVAVLNQGKICEHGTHEEL 683

  Fly   672 MGIQEGVFRELVASQA 687
            :....|::|:|:..|:
  Rat   684 LLKPNGLYRKLMNKQS 699

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3156NP_569844.2 MdlB 106..687 CDD:224055 294/581 (51%)
ABC_membrane 127..395 CDD:279056 121/267 (45%)
ABC_MTABC3_MDL1_MDL2 447..686 CDD:213216 140/238 (59%)
Abcb10NP_001012166.1 3a01208 10..694 CDD:273363 309/659 (47%)
ABC_membrane 142..403 CDD:279056 118/262 (45%)
ABC_MTABC3_MDL1_MDL2 458..698 CDD:213216 140/239 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166352447
Domainoid 1 1.000 233 1.000 Domainoid score I2315
eggNOG 1 0.900 - - E2759_KOG0058
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6474
Inparanoid 1 1.050 579 1.000 Inparanoid score I989
OMA 1 1.010 - - QHG54509
OrthoDB 1 1.010 - - D221577at33208
OrthoFinder 1 1.000 - - FOG0000243
OrthoInspector 1 1.000 - - oto98068
orthoMCL 1 0.900 - - OOG6_100059
Panther 1 1.100 - - O PTHR24221
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2387
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.770

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