DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3156 and Abcb11

DIOPT Version :9

Sequence 1:NP_569844.2 Gene:CG3156 / 30994 FlyBaseID:FBgn0023536 Length:692 Species:Drosophila melanogaster
Sequence 2:NP_001350421.1 Gene:Abcb11 / 27413 MGIID:1351619 Length:1321 Species:Mus musculus


Alignment Length:621 Identity:212/621 - (34%)
Similarity:320/621 - (51%) Gaps:66/621 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 TKSEKWVLTAGIGC-----------LVVSSAIT------------MSVPLFLGKV--------ID 149
            :..:.|::..|..|           ::|...:|            :|:|   .||        |:
Mouse    55 SSKDNWLMFMGSVCALLHGMAQPGMIIVFGILTDIFVEYDIERQELSIP---EKVCMNNTIVWIN 116

  Fly   150 VVFNKS----------GMDSAAMAKLGEYSVLLFGIFVLGGFANFARVHLFGNAALRIVRSLRSR 204
            ..||::          .::|..:...|.|:.:...:.:||.|    ::.|:.....|.:|.:|..
Mouse   117 SSFNQNMTNGTSCGLVDINSEVIKFSGIYAGVGVAVLILGYF----QIRLWVITGARQIRKMRKF 177

  Fly   205 LYRSMLMQEVGWFDTKGTGELINRLSNDTLMVGTSLSQNVSDGLR--SVAMIGVGTGMMIYTSPQ 267
            .:|.::..|:||||....|||.:|.|:|...:..:::..::..|:  |.|:.|:..|  .|...:
Mouse   178 YFRRIMRMEIGWFDCTSVGELNSRFSDDINKIDEAIADQMALFLQRLSTALSGLLLG--FYRGWK 240

  Fly   268 LAAVSALVVPAMAGMAIVYGRYVRRITKVELDKYAEIMKFAEERFGNVKTVKTFCREQQEVAAFD 332
            |..|...|.|.:...|.|.|..|.:.|::||..||:....|:|...:::||..|..|.:||..::
Mouse   241 LTLVILAVSPLIGIGAAVIGLSVAKFTELELKAYAKAGSIADEVLSSIRTVAAFGGENKEVERYE 305

  Fly   333 GKLDEALQIGYKETRARAIFFG----LTGFCGNFIIISVLYYGGTLVLQD-SLTIGALTAFMLYA 392
            ..|..|.:.|..:......|.|    |..||    .....:||..|||.: ..|.|.|....|..
Mouse   306 KNLMFAQRWGIWKGMVMGFFTGYMWCLIFFC----YALAFWYGSRLVLDEGEYTPGTLIQIFLCV 366

  Fly   393 GYVAISMNGLSNFYSQLNKGIGASERIWEILDRECSIPIDKG-VVPLEKPVGEVGFQNVFFTFPT 456
            ...|:::...|:.....:.|..|:..|::.:||:..:....| ...|::..||:.|.||.|.:|:
Mouse   367 IIAAMNIGNASSCLEIFSTGCSAASSIFQTIDRQPVMDCMSGDGYKLDRIKGEIEFHNVTFHYPS 431

  Fly   457 RPESAVLTDFSLNLMPGTTTAVVGRSGSGKTTIALLMLRLYDPQGGTVHLDGIDLRTVNPQWLRN 521
            |||..:|.:.|:.:.||.|||.||.||:||:|...|:.|.|||..|.|.|||.|:|::|.:|||:
Mouse   432 RPEVKILNNLSMVIKPGETTAFVGSSGAGKSTALQLIQRFYDPCEGMVTLDGHDIRSLNIRWLRD 496

  Fly   522 NIGAVSQEPVLFSCSIRENILYGANPGETPSPERLQQVIEDANVSQFTDQLPDGLDTLVGQRGMM 586
            .||.|.|||||||.:|.|||..|.   |..:.|.:.|..:|||...|...||...|||||:.|..
Mouse   497 QIGIVEQEPVLFSTTIAENIRLGR---EEATMEDIVQAAKDANAYNFIMALPQQFDTLVGEGGGQ 558

  Fly   587 LSGGQKQRVAIARALIKNPAILILDEATSALDAVSENLVQNALDNLIQGRTVLTIAHRLSTIRNA 651
            :|||||||||||||||:.|.||:||.||||||..||..||.||:.:..|.|::::||||||:|:|
Mouse   559 MSGGQKQRVAIARALIRKPKILLLDMATSALDNESEAKVQGALNKIQHGHTIISVAHRLSTVRSA 623

  Fly   652 DQIAVLSDGKIVEQGSYNELMGIQEGVFRELVASQA 687
            |.|.....|..||:|::.||:. ::||:..||..|:
Mouse   624 DVIIGFEHGTAVERGTHEELLE-RKGVYFMLVTLQS 658

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3156NP_569844.2 MdlB 106..687 CDD:224055 211/619 (34%)
ABC_membrane 127..395 CDD:279056 76/315 (24%)
ABC_MTABC3_MDL1_MDL2 447..686 CDD:213216 122/238 (51%)
Abcb11NP_001350421.1 AAA 29..1314 CDD:333001 212/621 (34%)
Interaction with HAX1. /evidence=ECO:0000250 651..674 3/8 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 662..722
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100059
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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