DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3156 and mdl1

DIOPT Version :9

Sequence 1:NP_569844.2 Gene:CG3156 / 30994 FlyBaseID:FBgn0023536 Length:692 Species:Drosophila melanogaster
Sequence 2:NP_595751.1 Gene:mdl1 / 2541285 PomBaseID:SPBC9B6.09c Length:726 Species:Schizosaccharomyces pombe


Alignment Length:678 Identity:257/678 - (37%)
Similarity:384/678 - (56%) Gaps:31/678 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 THLCTTLRVRKSSQIRLSTSYNHHLGRCLHHRTARS----LQHSLPPPNRYHSHLHP--TLRMPW 67
            |.|..|......|..:||:..|..|.......::.|    .::|.|.|  :...:.|  :|....
pombe    45 TLLLPTPNAEYYSTSKLSSQVNVSLNSLSQKASSGSKIYPFKNSFPLP--FSRSILPIRSLAFLK 107

  Fly    68 WCMRRGFAQSSKWLARNAKANLPTAVGA-GIVPAPVKMGRSQYGRLLSLTKSEKWVLTAGIGCLV 131
            .|:|......||    :.:|...:.:.. |.:..|.|  :....||.:|.:.:.|........|:
pombe   108 LCVRHNSTVPSK----DEQAQDISKINTNGTLQTPNK--KVNVFRLFTLARGQGWNFFIAGSLLL 166

  Fly   132 VSSAITMSVPLFLGKVIDVVFNKSGMDSAAMAKL----GEYSVLLFGIFVLGGFANFARVHLFGN 192
            |||.:|||:|..:||::|.  ..|| ||:....:    |.:.:.|.|:|.||...||.|:.....
pombe   167 VSSGVTMSIPYIVGKILDA--GSSG-DSSVTHIMGIPSGTFYIGLLGLFFLGSACNFGRIITLRL 228

  Fly   193 AALRIVRSLRSRLYRSMLMQEVGWFDTKGTGELINRLSNDTLMVGTSLSQNVSDGLRSVAMIGVG 257
            .:.|||..||:||:...:..:..:||....|:||:||:.|:.:||.|||..:||||||......|
pombe   229 LSERIVSRLRARLFAKCMSLDGAFFDFHKHGDLISRLTTDSSIVGKSLSMYLSDGLRSSVSAIAG 293

  Fly   258 TGMMIYTSPQLAAVSALVVPAMAGMAIVYGRYVRRITKVELDKYAEIMKFAEERFGNVKTVKTFC 322
            .|||:|.|.:|....:|:||.:|..|..||.|||::::...|...::.:.:||:..||:|.:.|.
pombe   294 IGMMLYVSMRLTGYMSLIVPPIALGAFFYGEYVRKLSRTTQDALGDLTRVSEEKLANVRTTQAFL 358

  Fly   323 REQQEVAAFDGKLDEALQIGYKETRARAIFFGLTGFCGNFIIISVLYYGGTLVLQDSLTIGALTA 387
            .|:|||..::..:.....:..:|..|..||||.|||.||..:|::|..||.:|....:|:|.|::
pombe   359 GERQEVNRYNDYIRNLFVLAKREAFASGIFFGSTGFLGNATVIAILALGGRMVAAGDITVGQLSS 423

  Fly   388 FMLYAGYVAISMNGLSNFYSQLNKGIGASERIWEILDRECSIPIDKGVVPLEKPVGE--VGFQNV 450
            |:||..|...|:.|||..::.:.||:||:.|::|:||.:..|....| :|:...||:  :.|:||
pombe   424 FLLYTVYAGGSIVGLSGCFTDIMKGLGAASRLFELLDAKPKIAPTVG-IPVPVTVGKAILSFRNV 487

  Fly   451 FFTFPTRPESAVLTDFSLNLMPGTTTAVVGRSGSGKTTIALLMLRLYDPQGGTVHLDGIDLRTVN 515
            .|.:||||.:::..:.|.::.|||..|:|..||.||:||:.|:||.|.|..|.:..||:|:.|.|
pombe   488 GFAYPTRPSASIFDNLSFDIHPGTNVAIVAPSGGGKSTISQLLLRFYAPSSGKILADGVDISTYN 552

  Fly   516 PQWLRNNIGAVSQEPVLFSCSIRENILYGANPGETPSPERLQQVIEDANVSQFTDQLPDGLDTLV 580
            ....|::.|.|.|||||||.:|.|||.||.:   ..|.|.::...:.||.| |....|:...|.|
pombe   553 VHQWRSHFGLVGQEPVLFSGTIGENIAYGKS---NASQEEIEDAAKRANCS-FVLSFPEKWSTQV 613

  Fly   581 GQRGMMLSGGQKQRVAIARALIKNPAILILDEATSALDAVSENLVQNALDNLIQGR--TVLTIAH 643
            |.||:.||||||||:||||||::|||.|||||||||||..:|.:|...:.:|:..|  |.:||||
pombe   614 GTRGLQLSGGQKQRIAIARALLRNPAFLILDEATSALDGEAEVMVDKTIQSLMHNRSMTTITIAH 678

  Fly   644 RLSTIRNADQIAVLSDGKIVEQGSYNEL 671
            :|:|||.||||.|:.|||::||||:..|
pombe   679 KLATIRRADQIIVVGDGKVLEQGSFERL 706

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3156NP_569844.2 MdlB 106..687 CDD:224055 235/574 (41%)
ABC_membrane 127..395 CDD:279056 100/271 (37%)
ABC_MTABC3_MDL1_MDL2 447..686 CDD:213216 113/227 (50%)
mdl1NP_595751.1 MdlB 141..723 CDD:224055 235/574 (41%)
ABC_membrane 164..430 CDD:279056 100/268 (37%)
P-loop_NTPase 484..720 CDD:304359 113/227 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 181 1.000 Domainoid score I807
eggNOG 1 0.900 - - E2759_KOG0058
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6474
Inparanoid 1 1.050 416 1.000 Inparanoid score I352
OMA 1 1.010 - - QHG54509
OrthoFinder 1 1.000 - - FOG0000243
OrthoInspector 1 1.000 - - oto101770
orthoMCL 1 0.900 - - OOG6_100059
Panther 1 1.100 - - O PTHR24221
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1969
SonicParanoid 1 1.000 - - X2387
TreeFam 1 0.960 - -
1413.860

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