DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3156 and Tap1

DIOPT Version :9

Sequence 1:NP_569844.2 Gene:CG3156 / 30994 FlyBaseID:FBgn0023536 Length:692 Species:Drosophila melanogaster
Sequence 2:NP_114444.2 Gene:Tap1 / 24811 RGDID:3817 Length:725 Species:Rattus norvegicus


Alignment Length:645 Identity:210/645 - (32%)
Similarity:318/645 - (49%) Gaps:43/645 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 WWCMRRG-FAQSSKWLAR------NAKANLPTA-----VGAGIVPAPVKMGRSQYGRLLSLTKSE 119
            |..:|.| .|....|.:|      :..|.||.|     :|....|:..|.......|:|....|:
  Rat    96 WGALREGDNAGLLHWNSRLDAFVLSYVAALPAAALWHKLGGFWAPSGHKGAGDMLCRMLGFLDSK 160

  Fly   120 KWVLTAGIGCLVVSSAITMSVPLFLGKVIDVVFNKSGMDSAA-----MAKLGEYSVLLFGIFVLG 179
            |..|...:..|::|....|::|.|.|::.|.:.......|.|     |..|...|..|  .|...
  Rat   161 KGRLHLVLVLLILSCLGEMAIPFFTGRITDWILQDKTAPSFARNMWLMCILTVASTAL--EFAGD 223

  Fly   180 GFANFARVHLFGNAALRIVRSLRSRLYRSMLMQEVGWFDTKGTGELINRLSNDTLMVGTSLSQNV 244
            |..|....|:...        :...::|::|.||.|:|....||.:.:|::.||    :::.:::
  Rat   224 GIYNITMGHMHSR--------VHGEVFRAVLHQETGFFLKNPTGSITSRVTEDT----SNVCESI 276

  Fly   245 SDGLRSVAMIGVGTGM-----MIYTSPQLAAVSALVVPAMAGMAIVYGRYVRRITKVELDKYAEI 304
            ||.| ::.:..:|.|:     ||:.|..|..|:.|.:|.:..:....|:..:.:.....:..|:.
  Rat   277 SDKL-NLFLWYLGRGLCLLAFMIWGSFYLTVVTLLSLPLLFLLPRRLGKVYQSLAVKVQESLAKS 340

  Fly   305 MKFAEERFGNVKTVKTFCREQQEVAAFDGKLDEALQIGYKETRARAIFFGLTGFCGNFIIISVLY 369
            .:.|.|....:.||::|..|:.|...|..||:|...:..||..|...........|..:.:.:||
  Rat   341 TQVALEALSAMPTVRSFANEEGEAQKFRQKLEEMKPLNKKEALAYVTEVWTMSVSGMLLKVGILY 405

  Fly   370 YGGTLVLQDSLTIGALTAFMLYAGYVAISMNGLSNFYSQLNKGIGASERIWEILDRECSIPIDKG 434
            .||.||::.:::.|.|.:|:||......::..|.:.|..:.|.:||||:|:|.|||....|:...
  Rat   406 LGGQLVVRGAVSSGNLVSFVLYQLQFTRAVEVLLSIYPSMQKSVGASEKIFEYLDRTPCSPLSGS 470

  Fly   435 VVPLEKPVGEVGFQNVFFTFPTRPESAVLTDFSLNLMPGTTTAVVGRSGSGKTTIALLMLRLYDP 499
            :.||... |.|.||:|.|.:|..|...||...:..|.||..||:||.:||||:|:|.|:..||.|
  Rat   471 LAPLNMK-GLVKFQDVSFAYPNHPNVQVLQGLTFTLYPGKVTALVGPNGSGKSTVAALLQNLYQP 534

  Fly   500 QGGTVHLDGIDLRTVNPQWLRNNIGAVSQEPVLFSCSIRENILYGANPGETPSPERLQQVIEDAN 564
            .||.|.|||..|...:..:|...:.||.|||:||..|.||||.||..  .||:.|.:..|..::.
  Rat   535 TGGKVLLDGELLVQYDHHYLHTQVAAVGQEPLLFGRSFRENIAYGLT--RTPTMEEITAVAMESG 597

  Fly   565 VSQFTDQLPDGLDTLVGQRGMMLSGGQKQRVAIARALIKNPAILILDEATSALDAVSENLVQNAL 629
            ...|....|.|.||.||:.|..|||||:|.||:|||||:.|.:||||:|||||||.::..||..|
  Rat   598 AHDFISGFPQGYDTEVGETGNQLSGGQRQAVALARALIRKPRLLILDDATSALDAGNQLRVQRLL 662

  Fly   630 DNLIQ--GRTVLTIAHRLSTIRNADQIAVLSDGKIVEQGSYNELMGIQEGVFRELVASQA 687
            ....:  .||||.|..:||....|..|..|.:|.:.|||::.:||. :.|.:|.:|.:.|
  Rat   663 YESPEWASRTVLLITQQLSLAERAHHILFLKEGSVCEQGTHLQLME-RGGCYRSMVEALA 721

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3156NP_569844.2 MdlB 106..687 CDD:224055 196/592 (33%)
ABC_membrane 127..395 CDD:279056 68/277 (25%)
ABC_MTABC3_MDL1_MDL2 447..686 CDD:213216 106/240 (44%)
Tap1NP_114444.2 3a01208 2..717 CDD:273363 208/639 (33%)
ABC_membrane 177..435 CDD:279056 66/272 (24%)
Part of the peptide-binding site. /evidence=ECO:0000250|UniProtKB:Q03518 352..397 12/44 (27%)
Part of the peptide-binding site. /evidence=ECO:0000250|UniProtKB:Q03518 430..464 12/33 (36%)
P-loop_NTPase 469..697 CDD:304359 102/230 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0058
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D684058at2759
OrthoFinder 1 1.000 - - FOG0000243
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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