DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3156 and Abcb1b

DIOPT Version :9

Sequence 1:NP_569844.2 Gene:CG3156 / 30994 FlyBaseID:FBgn0023536 Length:692 Species:Drosophila melanogaster
Sequence 2:NP_036755.3 Gene:Abcb1b / 24646 RGDID:3318 Length:1275 Species:Rattus norvegicus


Alignment Length:646 Identity:219/646 - (33%)
Similarity:340/646 - (52%) Gaps:78/646 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 GFAQSSKWLARNAKANLPTAVG--AGIVPAPVKMGRSQYGRLL------------SLTKSEKWVL 123
            |..:.:.||.:     |..|:|  |.|:          :|.||            |.|::|..:|
  Rat    36 GMFRYADWLDK-----LCMALGTLAAII----------HGTLLPLLMLVFGYMTDSFTQAETRIL 85

  Fly   124 TAGIGCLVVSSAITMSVPLFLGKVIDVVFNKSGMDSAAMAKLGEYSVLLFGIFVLGGFANFARVH 188
            .:......::|..|:|                  ||:....:..|:....||........:.:|.
  Rat    86 PSVTNQSEINSTQTVS------------------DSSLEEDMAMYAYYYTGIGAGVLIVAYIQVS 132

  Fly   189 LFGNAALRIVRSLRSRLYRSMLMQEVGWFDTKGTGELINRLSNDTLMVGTSLSQNVSDGLRSVAM 253
            |:..||.|.:..:|.:.:.:::.||:||||....|||..||::|...:...:...:....:|:..
  Rat   133 LWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVNDAGELNTRLTDDVSKINDGIGDKLGMFFQSITT 197

  Fly   254 IGVGTGMMIYTSPQLAAVSALVVPAMAGMAIVYGRYVRRITKVELDKYAEIMKFAEERFGNVKTV 318
            ...|..:...:..:|..|...|.|.:...:.::.:.:...|..||..||:....|||....::||
  Rat   198 FSAGFIIGFISGWKLTLVILAVSPLIGLSSAMWAKVLTSFTNKELQAYAKAGAVAEEVLAAIRTV 262

  Fly   319 KTFCREQQEVAAFDGKLDEALQIGYKETRARAIFFGLTGFCGNFIIISVLY-----YGGTLVLQD 378
            ..|..:::|:..::..|:||.::|.|:.....|..|:.     ::::...|     ||.:|||.:
  Rat   263 IAFGGQKKELERYNKNLEEAKRVGIKKAITANISIGIA-----YLLVYASYALAFWYGTSLVLSN 322

  Fly   379 SLTIG-ALTAFM------LYAGYVAISMNGLSNFYSQLNKGIGASERIWEILDRECSIP--IDKG 434
            ..:|| .||.|.      ...|::|.::...:|       ..||:..|::|:|.|.||.  ..||
  Rat   323 EYSIGQVLTVFFSILLGTFSIGHLAPNIEAFAN-------ARGAAYEIFKIIDNEPSIDSFSTKG 380

  Fly   435 VVPLEKPVGEVGFQNVFFTFPTRPESAVLTDFSLNLMPGTTTAVVGRSGSGKTTIALLMLRLYDP 499
            ..| :..:|.:.|:||:|.:|:|.|..:|...:|.:..|.|.|:||.||.||:|...|:.|||||
  Rat   381 HKP-DSIMGNLEFKNVYFNYPSRSEVKILKGLNLKVKSGQTVALVGNSGCGKSTTVQLLQRLYDP 444

  Fly   500 QGGTVHLDGIDLRTVNPQWLRNNIGAVSQEPVLFSCSIRENILYGANPGETPSPERLQQVIEDAN 564
            ..|.|.:||.|:||:|.::||..||.||||||||:.:|.|||.||.   |..:.:.:::.:::||
  Rat   445 IEGEVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGR---ENVTMDEIEKAVKEAN 506

  Fly   565 VSQFTDQLPDGLDTLVGQRGMMLSGGQKQRVAIARALIKNPAILILDEATSALDAVSENLVQNAL 629
            ...|..:||...:||||:||..||||||||:||||||::||.||:|||||||||..||.:||.||
  Rat   507 AYDFIMKLPHKFNTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAAL 571

  Fly   630 DNLIQGRTVLTIAHRLSTIRNADQIAVLSDGKIVEQGSYNELMGIQEGVFRELVASQAFGS 690
            |...:|||.:.|||||||:||||.||....|.|||||::.|||. ::|::.:||.:|..|:
  Rat   572 DKAREGRTTIVIAHRLSTVRNADVIAGFDGGVIVEQGNHEELMK-EKGIYFKLVMTQTRGN 631

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3156NP_569844.2 MdlB 106..687 CDD:224055 209/606 (34%)
ABC_membrane 127..395 CDD:279056 63/279 (23%)
ABC_MTABC3_MDL1_MDL2 447..686 CDD:213216 125/238 (53%)
Abcb1bNP_036755.3 PTZ00265 54..1269 CDD:240339 213/623 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100059
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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