DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3156 and Abcb1b

DIOPT Version :10

Sequence 1:NP_569844.2 Gene:CG3156 / 30994 FlyBaseID:FBgn0023536 Length:692 Species:Drosophila melanogaster
Sequence 2:NP_036755.3 Gene:Abcb1b / 24646 RGDID:3318 Length:1275 Species:Rattus norvegicus


Alignment Length:646 Identity:219/646 - (33%)
Similarity:340/646 - (52%) Gaps:78/646 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 GFAQSSKWLARNAKANLPTAVG--AGIVPAPVKMGRSQYGRLL------------SLTKSEKWVL 123
            |..:.:.||.:     |..|:|  |.|:          :|.||            |.|::|..:|
  Rat    36 GMFRYADWLDK-----LCMALGTLAAII----------HGTLLPLLMLVFGYMTDSFTQAETRIL 85

  Fly   124 TAGIGCLVVSSAITMSVPLFLGKVIDVVFNKSGMDSAAMAKLGEYSVLLFGIFVLGGFANFARVH 188
            .:......::|..|:|                  ||:....:..|:....||........:.:|.
  Rat    86 PSVTNQSEINSTQTVS------------------DSSLEEDMAMYAYYYTGIGAGVLIVAYIQVS 132

  Fly   189 LFGNAALRIVRSLRSRLYRSMLMQEVGWFDTKGTGELINRLSNDTLMVGTSLSQNVSDGLRSVAM 253
            |:..||.|.:..:|.:.:.:::.||:||||....|||..||::|...:...:...:....:|:..
  Rat   133 LWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVNDAGELNTRLTDDVSKINDGIGDKLGMFFQSITT 197

  Fly   254 IGVGTGMMIYTSPQLAAVSALVVPAMAGMAIVYGRYVRRITKVELDKYAEIMKFAEERFGNVKTV 318
            ...|..:...:..:|..|...|.|.:...:.::.:.:...|..||..||:....|||....::||
  Rat   198 FSAGFIIGFISGWKLTLVILAVSPLIGLSSAMWAKVLTSFTNKELQAYAKAGAVAEEVLAAIRTV 262

  Fly   319 KTFCREQQEVAAFDGKLDEALQIGYKETRARAIFFGLTGFCGNFIIISVLY-----YGGTLVLQD 378
            ..|..:::|:..::..|:||.::|.|:.....|..|:.     ::::...|     ||.:|||.:
  Rat   263 IAFGGQKKELERYNKNLEEAKRVGIKKAITANISIGIA-----YLLVYASYALAFWYGTSLVLSN 322

  Fly   379 SLTIG-ALTAFM------LYAGYVAISMNGLSNFYSQLNKGIGASERIWEILDRECSIP--IDKG 434
            ..:|| .||.|.      ...|::|.::...:|       ..||:..|::|:|.|.||.  ..||
  Rat   323 EYSIGQVLTVFFSILLGTFSIGHLAPNIEAFAN-------ARGAAYEIFKIIDNEPSIDSFSTKG 380

  Fly   435 VVPLEKPVGEVGFQNVFFTFPTRPESAVLTDFSLNLMPGTTTAVVGRSGSGKTTIALLMLRLYDP 499
            ..| :..:|.:.|:||:|.:|:|.|..:|...:|.:..|.|.|:||.||.||:|...|:.|||||
  Rat   381 HKP-DSIMGNLEFKNVYFNYPSRSEVKILKGLNLKVKSGQTVALVGNSGCGKSTTVQLLQRLYDP 444

  Fly   500 QGGTVHLDGIDLRTVNPQWLRNNIGAVSQEPVLFSCSIRENILYGANPGETPSPERLQQVIEDAN 564
            ..|.|.:||.|:||:|.::||..||.||||||||:.:|.|||.||.   |..:.:.:::.:::||
  Rat   445 IEGEVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGR---ENVTMDEIEKAVKEAN 506

  Fly   565 VSQFTDQLPDGLDTLVGQRGMMLSGGQKQRVAIARALIKNPAILILDEATSALDAVSENLVQNAL 629
            ...|..:||...:||||:||..||||||||:||||||::||.||:|||||||||..||.:||.||
  Rat   507 AYDFIMKLPHKFNTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAAL 571

  Fly   630 DNLIQGRTVLTIAHRLSTIRNADQIAVLSDGKIVEQGSYNELMGIQEGVFRELVASQAFGS 690
            |...:|||.:.|||||||:||||.||....|.|||||::.|||. ::|::.:||.:|..|:
  Rat   572 DKAREGRTTIVIAHRLSTVRNADVIAGFDGGVIVEQGNHEELMK-EKGIYFKLVMTQTRGN 631

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3156NP_569844.2 MdlB 103..687 CDD:440747 209/609 (34%)
Abcb1bNP_036755.3 PTZ00265 54..1269 CDD:240339 213/623 (34%)

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