DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3156 and pgp-7

DIOPT Version :9

Sequence 1:NP_569844.2 Gene:CG3156 / 30994 FlyBaseID:FBgn0023536 Length:692 Species:Drosophila melanogaster
Sequence 2:NP_001361833.1 Gene:pgp-7 / 188697 WormBaseID:WBGene00004001 Length:1152 Species:Caenorhabditis elegans


Alignment Length:600 Identity:201/600 - (33%)
Similarity:308/600 - (51%) Gaps:40/600 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 EKWVLTAGIGCLVVSSAITMSVPLFLGKVIDVV------FNKSGMDSAAMAKL------GEYSVL 171
            ||::...|:...:|:......|...||:...|:      .|...:|.|.:.|.      |.|.|:
 Worm    39 EKFLFLIGVFFSLVTGLCQPFVSYTLGETAQVLVTITNAINNKTIDPADLKKAYEQYERGMYQVV 103

  Fly   172 LFGIFVLG-GFANFARV------HLFGNAALRIVRSLRSRLYRSMLMQEVGWFDTKGTGELINRL 229
            |: .|:.| .:..||.:      ::..|...|:.:...|||.|    ::..:||...||.|...|
 Worm   104 LY-FFLCGCAYFTFASIQHAIMKYVGDNTTYRVRKQYISRLLR----KDAEYFDNVSTGHLSTVL 163

  Fly   230 SNDTLMVGTSLSQNVSDGLRSVAMIGVGTGMMIYTSPQLAAVSALVVPAMAGMAIVYGRYVRRIT 294
            :::........::.::.....:....|||.:..||..:||:........:|....:....|.:.|
 Worm   164 NDNLERFREVFNEKIALIFALLTDFVVGTALAFYTDWRLASYGIFFSLGIAFSGFINSAGVMKTT 228

  Fly   295 KVELDKYAEIMKFAEERFGNVKTVKTFCREQQEVAAFDGKLDEALQIGYKETRARAIFF----GL 355
            ..:...||.....|.:..|..|||.:...:..|:..:    .|.|:.|.|....||:.:    |.
 Worm   229 GKQNTHYANAGSIAFQTLGAYKTVCSLNGQNTEIERY----TEELKAGEKYGIHRALMYSISRGF 289

  Fly   356 TGFCGNFIIISVLYYGGTLVLQDSLTIGALTAFMLYAGYVAISMNGLSNFYSQLNKGIGASERIW 420
            |.|..|.:...:||.|..::...||....:.....|..:.|..::......|:|...|.::..|.
 Worm   290 TYFFCNSLNTVILYVGANMIYSGSLEPAVVVRIFHYMMFGAFCLSEALPHISRLAGAISSTAPIA 354

  Fly   421 EILDRECSIPIDKGVVPLEKPV---GEVGFQNVFFTFPTRPESAVLTDFSLNLMPGTTTAVVGRS 482
            |:|.:|.:: |:|.....:..|   |.:.|:||.|::||||::.||...|.::..|...|:||.|
 Worm   355 EMLIKEDNV-IEKDETDYDVEVEVNGNISFKNVKFSYPTRPDAQVLKGISFDVQNGECIALVGAS 418

  Fly   483 GSGKTTIALLMLRLYDPQGGTVHLDGIDLRTVNPQWLRNNIGAVSQEPVLFSCSIRENILYGANP 547
            ||||:|:..|:|..|:...|.:.:||:||..:|.:.||..||.||||||||:.:|.|||.:| ||
 Worm   419 GSGKSTVVQLLLHYYNIDSGNIFIDGMDLNDMNIKRLRRVIGVVSQEPVLFNTTIEENIRFG-NP 482

  Fly   548 GETPSPERLQQVIEDANVSQFTDQLPDGLDTLVGQRGMMLSGGQKQRVAIARALIKNPAILILDE 612
             ....|| :...:..||...|....|.|:.|:||:||..||||||||:||||.|::||.||:|||
 Worm   483 -NVSLPE-IYGALRKANAYDFVCSFPKGIKTIVGERGTQLSGGQKQRIAIARTLVRNPKILLLDE 545

  Fly   613 ATSALDAVSENLVQNALDNLIQGRTVLTIAHRLSTIRNADQIAVLSDGKIVEQGSYNELMGIQEG 677
            ||||||..||.:||.||:|..||||.:.:||||||||||.:|.|:..|:|||.|:::||:. :.|
 Worm   546 ATSALDNESEQVVQKALENASQGRTTIVVAHRLSTIRNASKIIVMQKGEIVEVGNHDELIA-KRG 609

  Fly   678 VFRELVASQAFGSRN 692
            |:.:||.:|...|.:
 Worm   610 VYNDLVQAQLLESHD 624

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3156NP_569844.2 MdlB 106..687 CDD:224055 199/593 (34%)
ABC_membrane 127..395 CDD:279056 63/290 (22%)
ABC_MTABC3_MDL1_MDL2 447..686 CDD:213216 121/238 (51%)
pgp-7NP_001361833.1 MdlB 42..621 CDD:224055 198/592 (33%)
ABC_MTABC3_MDL1_MDL2 381..618 CDD:213216 121/240 (50%)
ABC_6TM_Pgp_ABCB1_D2_like 686..994 CDD:350022
TM helix 1 695..718 CDD:350022
TM helix 2 733..781 CDD:350022
TM helix 3 790..835 CDD:350022
TM helix 4 836..885 CDD:350022
TM helix 5 897..947 CDD:350022
TM helix 6 956..989 CDD:350022
P-loop_NTPase 1019..>1143 CDD:393306
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162807
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100059
Panther 1 1.100 - - O PTHR24221
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.840

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