DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3156 and Abcb1a

DIOPT Version :9

Sequence 1:NP_569844.2 Gene:CG3156 / 30994 FlyBaseID:FBgn0023536 Length:692 Species:Drosophila melanogaster
Sequence 2:NP_035206.2 Gene:Abcb1a / 18671 MGIID:97570 Length:1276 Species:Mus musculus


Alignment Length:641 Identity:226/641 - (35%)
Similarity:337/641 - (52%) Gaps:69/641 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 RNAKANLPTAVGAGIVPAPVKMGRSQYGRLLSLTKSEKWVLTAGIGCLVVSSAITMSVPLFLGKV 147
            ::.|.:...|:...:.||       .:.|:|.|..:|......||.|.:::..:..:..:...||
Mouse   674 QDRKLSTKEALDEDVPPA-------SFWRILKLNSTEWPYFVVGIFCAIINGGLQPAFSVIFSKV 731

  Fly   148 IDVVFN---------KSGMDSAAMAKLGEYSVLLFGIFVLGGFANFARVHLFGNAALRIVRSLRS 203
            :.|..|         .|.:.|.....||   ::.|..|.|.||.       ||.|...:.:.||.
Mouse   732 VGVFTNGGPPETQRQNSNLFSLLFLILG---IISFITFFLQGFT-------FGKAGEILTKRLRY 786

  Fly   204 RLYRSMLMQEVGWFD--TKGTGELINRLSNDTLMVGTSLSQNVSDGLRSVAMIGVGTGMMIYTSP 266
            .:::|||.|:|.|||  ...||.|..||:||...|..:....::...:::|.:|.|..:.:....
Mouse   787 MVFKSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGATGSRLAVIFQNIANLGTGIIISLIYGW 851

  Fly   267 QLAAVSALVVP--AMAG---MAIVYGRYVRRITKVELDKYAEIMKFAEERFGNVKTVKTFCREQQ 326
            ||..:...:||  |:||   |.::.|:.::  .|.||:...   |.|.|...|.:||.:..|||:
Mouse   852 QLTLLLLAIVPIIAIAGVVEMKMLSGQALK--DKKELEGSG---KIATEAIENFRTVVSLTREQK 911

  Fly   327 EVAAFDGKLDEALQIGYKETRARAIFFGLTGFCGNFIIISVLYY---------GGTLVLQDSLTI 382
                |:....::|||.|:....:|..||:|     |.....:.|         |..||.|..:|.
Mouse   912 ----FETMYAQSLQIPYRNAMKKAHVFGIT-----FSFTQAMMYFSYAACFRFGAYLVTQQLMTF 967

  Fly   383 GALTAFMLYAGYV--AISMNGLSNFYSQLNKGIGASERIWEILDR--ECSIPIDKGVVP--LEKP 441
            .  ...::::..|  |:::..:|:|.....|...::..|..|:::  |......:|:.|  ||  
Mouse   968 E--NVLLVFSAIVFGAMAVGQVSSFAPDYAKATVSASHIIRIIEKTPEIDSYSTQGLKPNMLE-- 1028

  Fly   442 VGEVGFQNVFFTFPTRPESAVLTDFSLNLMPGTTTAVVGRSGSGKTTIALLMLRLYDPQGGTVHL 506
             |.|.|..|.|.:||||...||...||.:..|.|.|:||.||.||:|:..|:.|.|||..|:|.|
Mouse  1029 -GNVQFSGVVFNYPTRPSIPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPMAGSVFL 1092

  Fly   507 DGIDLRTVNPQWLRNNIGAVSQEPVLFSCSIRENILYGANPGETPSPERLQQVIEDANVSQFTDQ 571
            ||.:::.:|.||||..:|.|||||:||.|||.|||.||.| ....|.|.:.:..::||:.||.|.
Mouse  1093 DGKEIKQLNVQWLRAQLGIVSQEPILFDCSIAENIAYGDN-SRVVSYEEIVRAAKEANIHQFIDS 1156

  Fly   572 LPDGLDTLVGQRGMMLSGGQKQRVAIARALIKNPAILILDEATSALDAVSENLVQNALDNLIQGR 636
            |||..:|.||.:|..||||||||:||||||::.|.||:|||||||||..||.:||.|||...:||
Mouse  1157 LPDKYNTRVGDKGTQLSGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALDKAREGR 1221

  Fly   637 TVLTIAHRLSTIRNADQIAVLSDGKIVEQGSYNELMGIQEGVFRELVASQAFGSRN 692
            |.:.||||||||:|||.|.|:.:||:.|.|::.:|:. |:|::..:|:.||...|:
Mouse  1222 TCIVIAHRLSTIQNADLIVVIQNGKVKEHGTHQQLLA-QKGIYFSMVSVQAGAKRS 1276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3156NP_569844.2 MdlB 106..687 CDD:224055 219/611 (36%)
ABC_membrane 127..395 CDD:279056 76/292 (26%)
ABC_MTABC3_MDL1_MDL2 447..686 CDD:213216 124/238 (52%)
Abcb1aNP_035206.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26
PTZ00265 47..1263 CDD:240339 222/626 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 646..681 1/6 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100059
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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