DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3156 and Abcb4

DIOPT Version :10

Sequence 1:NP_569844.2 Gene:CG3156 / 30994 FlyBaseID:FBgn0023536 Length:692 Species:Drosophila melanogaster
Sequence 2:NP_032856.2 Gene:Abcb4 / 18670 MGIID:97569 Length:1276 Species:Mus musculus


Alignment Length:617 Identity:221/617 - (35%)
Similarity:329/617 - (53%) Gaps:63/617 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 AVGAGIVPAPVKMGRSQYGRLLSLTKSEKWVLTAGIGCLVVSSAITMSVPLFLGKVIDVVFNKSG 156
            |.|:|:   |:.|  ..:|.:     ::|:|...|...|.|:.:::|..|   |::::       
Mouse    63 AHGSGL---PLMM--IVFGEM-----TDKFVDNTGNFSLPVNFSLSMLNP---GRILE------- 107

  Fly   157 MDSAAMAKLGEYSVLLFGIFVLGG---FANFARVHLFGNAALRIVRSLRSRLYRSMLMQEVGWFD 218
                  .::..|:....|   |||   .|.:.:|..:..||.|.::.:|.:.:.::|.||:||||
Mouse   108 ------EEMTRYAYYYSG---LGGGVLVAAYIQVSFWTLAAGRQIKKIRQKFFHAILRQEMGWFD 163

  Fly   219 TKGTGELINRLSNDTLMVGTSLSQNVSDGLRSVAMIGVGTGMMIYTSPQLAAVSALVVPAMAGMA 283
            .|||.||..||::|...:...:...|....:::|....|..:......:|..|...:.|.:....
Mouse   164 IKGTTELNTRLTDDVSKISEGIGDKVGMFFQAIATFFAGFIVGFIRGWKLTLVIMAISPILGLST 228

  Fly   284 IVYGRYVRRITKVELDKYAEIMKFAEERFGNVKTVKTFCREQQEVAAFDGKLDEALQIGYKETRA 348
            .|:.:.:...:..||..||:....|||..|.::||..|..:.:|:..:...|:.|.:||.|:..:
Mouse   229 AVWAKILSTFSDKELAAYAKAGAVAEEALGAIRTVIAFGGQNKELERYQKHLENAKKIGIKKAIS 293

  Fly   349 RAIFFGLTGFCGNFIIISVLY-----YGGTLVLQDSLTIG-ALTAFM------LYAGYVAISMNG 401
            ..|..|:.     |::|...|     ||.|||:....||| |:|.|.      ...|..|..::.
Mouse   294 ANISMGIA-----FLLIYASYALAFWYGSTLVISKEYTIGNAMTVFFSILIGAFSVGQAAPCIDA 353

  Fly   402 LSNFYSQLNKGIGASERIWEILDRECSIP--IDKGVVPLEKPVGEVGFQNVFFTFPTRPESAVLT 464
            .:|       ..||:..|::|:|....|.  .::|..| :...|.:.|.:|.|::|:|....:|.
Mouse   354 FAN-------ARGAAYVIFDIIDNNPKIDSFSERGHKP-DNIKGNLEFSDVHFSYPSRANIKILK 410

  Fly   465 DFSLNLMPGTTTAVVGRSGSGKTTIALLMLRLYDPQGGTVHLDGIDLRTVNPQWLRNNIGAVSQE 529
            ..:|.:..|.|.|:||.||.||:|...|:.|||||..|.:.:||.|:|..|.:.||..||.||||
Mouse   411 GLNLKVKSGQTVALVGNSGCGKSTTVQLLQRLYDPTEGKISIDGQDIRNFNVRCLREIIGVVSQE 475

  Fly   530 PVLFSCSIRENILYGANPGETPSPERLQQVIEDANVSQFTDQLPDGLDTLVGQRGMMLSGGQKQR 594
            |||||.:|.|||.||..   ..:.:.:::.:::||...|..:||...|||||.||..||||||||
Mouse   476 PVLFSTTIAENIRYGRG---NVTMDEIEKAVKEANAYDFIMKLPQKFDTLVGDRGAQLSGGQKQR 537

  Fly   595 VAIARALIKNPAILILDEATSALDAVSENLVQNALDNLIQGRTVLTIAHRLSTIRNADQIAVLSD 659
            :||||||::||.||:|||||||||..||..||.|||...:|||.:.||||||||||||.||...|
Mouse   538 IAIARALVRNPKILLLDEATSALDTESEAEVQAALDKAREGRTTIVIAHRLSTIRNADVIAGFED 602

  Fly   660 GKIVEQGSYNELMGIQEGVFRELVASQAFGSR 691
            |.||||||::|||. :||::..||..|..||:
Mouse   603 GVIVEQGSHSELMK-KEGIYFRLVNMQTAGSQ 633

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3156NP_569844.2 MdlB 103..687 CDD:440747 214/600 (36%)
Abcb4NP_032856.2 PTZ00265 30..1269 CDD:240339 221/617 (36%)
MdlB 39..632 CDD:440747 219/614 (36%)
Interaction with HAX1. /evidence=ECO:0000250 622..646 5/12 (42%)

Return to query results.
Submit another query.