DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3156 and pgp-13

DIOPT Version :9

Sequence 1:NP_569844.2 Gene:CG3156 / 30994 FlyBaseID:FBgn0023536 Length:692 Species:Drosophila melanogaster
Sequence 2:NP_001359545.1 Gene:pgp-13 / 184845 WormBaseID:WBGene00004007 Length:1323 Species:Caenorhabditis elegans


Alignment Length:592 Identity:206/592 - (34%)
Similarity:320/592 - (54%) Gaps:52/592 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 VLTAGIGCLVVSSAITMSVPLFLGKVIDVVFNKSGMDSAAMAKLGE--YSVLLFGIFVLGGFANF 184
            :|..|:...|:|......:.:..|::.:|:.....:......|..|  |..|..||||  ...:|
 Worm    92 LLLIGLITSVISGVSQPVLAIISGRMTNVLLVIDPLSKEFKTKTMENVYIFLGLGIFV--SINDF 154

  Fly   185 ARVHLFGNAALRIVRSLRSRLYRSMLMQEVGWFDTKGTGELINRLSNDTLMVGTSLSQNVSDG-- 247
            .:...|.....|::..:|:|...|:|.|..||||...:|.:..|| ||.:       :.:.||  
 Worm   155 CQYMCFQRVCSRMMTVMRNRYISSILRQNAGWFDKNLSGTITTRL-NDNM-------ERIQDGVG 211

  Fly   248 ------LRSVAMIGVGTGMMIYTSPQLAAVSALVVPAMAGMAIVYGRYVRRITKVELDKYAEIMK 306
                  :|.::|:.....:.:....:||.:...::|.......:..|::.:.|..||:|..|...
 Worm   212 DKLGVLIRGISMVIASVVISLIYEWRLALMMLGLIPVSTICMTLLSRFLEKSTGEELEKVGEAGA 276

  Fly   307 FAEERFGNVKTVKTFCREQQEVAAFDGKLDEALQIGYKETRARAIFFGL-TGFCGNFIIISV--- 367
            .|||....|:|::.|..:::.||.::.:|:..        :..||:.|. :||.|......:   
 Worm   277 IAEECLMGVRTIQAFNGQEEMVAKYEKQLNSG--------KKHAIWGGFWSGFFGGIFFFWLMAF 333

  Fly   368 ----LYYGGTL----VLQDSLTIGALTAFMLYAGYVAISMNGL--SNFYSQLNKGIGASERIWEI 422
                :.|||.|    :::....:..:...||...|..    ||  .:....||..:.|:. |::.
 Worm   334 MGCGILYGGYLLKVGIIKSPGDVFIIVVAMLLGAYFL----GLISPHLMVLLNARVAAAS-IYKT 393

  Fly   423 LDRECSI-PIDKGVVPLEKPVGEVGFQNVFFTFPTRPESAVLTDFSLNLMPGTTTAVVGRSGSGK 486
            :||...| |..:....:||.||:|.|:||.|.:|||.|:.||...:|.:.|||:.|:||.||.||
 Worm   394 IDRVPKIDPYSRHGKKIEKVVGKVTFENVHFRYPTRKEAKVLNGLNLTVEPGTSVALVGHSGCGK 458

  Fly   487 TTIALLMLRLYDPQGGTVHLDGIDLRTVNPQWLRNNIGAVSQEPVLFSCSIRENILYGANPGETP 551
            :|...|:.|||:|:.|:|.:||:|:|.:|.:||||.:|.|.|||:||:.:|..|:|:| ||..| 
 Worm   459 STSVGLLTRLYEPEQGSVQIDGVDVRDLNLEWLRNVVGIVQQEPILFNDTIHNNLLFG-NPDAT- 521

  Fly   552 SPERLQQVIEDANVSQFTDQLPDGLDTLVGQRGMMLSGGQKQRVAIARALIKNPAILILDEATSA 616
             .|.:.:|.:.||...|..::|.|.||.:|..|:.|||||||||||||.||::|.:|:|||||||
 Worm   522 -RETMIRVCKMANAHDFIKKMPKGYDTQIGDGGVQLSGGQKQRVAIARTLIRDPKVLLLDEATSA 585

  Fly   617 LDAVSENLVQNALDNLIQGRTVLTIAHRLSTIRNADQIAVLSDGKIVEQGSYNELMGIQEGVFRE 681
            |||.||::||:||:|..:|||.:.|||||||||.||:|.....|.|||.|::.||:.: .|.:.:
 Worm   586 LDAQSESVVQSALNNASKGRTTIMIAHRLSTIREADKIVFFEKGVIVEAGNHEELVNL-GGRYFD 649

  Fly   682 LVASQAF 688
            ||.:|||
 Worm   650 LVKAQAF 656

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3156NP_569844.2 MdlB 106..687 CDD:224055 203/589 (34%)
ABC_membrane 127..395 CDD:279056 63/289 (22%)
ABC_MTABC3_MDL1_MDL2 447..686 CDD:213216 122/238 (51%)
pgp-13NP_001359545.1 PTZ00265 92..1317 CDD:240339 206/592 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100059
Panther 1 1.100 - - O PTHR24221
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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