DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3156 and pgp-11

DIOPT Version :9

Sequence 1:NP_569844.2 Gene:CG3156 / 30994 FlyBaseID:FBgn0023536 Length:692 Species:Drosophila melanogaster
Sequence 2:NP_001364583.1 Gene:pgp-11 / 183971 WormBaseID:WBGene00004005 Length:1241 Species:Caenorhabditis elegans


Alignment Length:615 Identity:185/615 - (30%)
Similarity:302/615 - (49%) Gaps:70/615 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 RSQYGRLLSLTKSEK--WVLTAGIGCLVVSSAITMSVPLFLGKVIDVVF---NKSGMDSAAMAKL 165
            |.....:::..|...  :::||.| |.::...|...|.|..|.:.|:..   |.:|.|...    
 Worm    28 RQSLNLMINFAKKSDLIFIITALI-CALLGGTIQPVVLLIGGWITDLYLTNGNTAGNDEFL---- 87

  Fly   166 GEYSVLL-------FGIFVLGGFANFARVH--LFGNAALRIVRSLRSRLYRSMLMQEVGWFDTKG 221
              ||||.       ||:.:|    ..|.:.  .......||:.|:|.....::|.|:..|.|...
 Worm    88 --YSVLTLIYAGLGFGVIIL----VLALIQGVCIQRGTSRILDSIRKEFLGAVLRQDANWLDKHS 146

  Fly   222 TGELINRLSNDTLMVGTSLSQNVSDGLRSVAMIGVGTGMMIYTSP---------QLAAVSALVVP 277
            :|.:..:| |:.:.|       :||||.:...:.| .|..::||.         ||..::..:.|
 Worm   147 SGSITCQL-NENIEV-------ISDGLGNKCCMLV-RGFAMFTSSIIACAFINWQLTFITFTMGP 202

  Fly   278 AMAGMAIVYGRYVRRITKVELDKYAEIMKFA-------EERFGNVKTVKTFCREQQEVAAFDGKL 335
            ..|.:       :..:|||......|:|..:       ||...||:||:: |..|..:.....::
 Worm   203 VSAFV-------LHLLTKVNEVSNEELMSLSAQSHAIIEESILNVRTVQS-CNGQNFMITKLNQV 259

  Fly   336 DEALQIGYKETRARAIFF-GLTGFCGNFIIISVLYYGGTLVLQDSLTIGALTAFMLYAGYVAIS- 398
            :|.::..|.::...|.|| ||..|...||....|::|..|.....  ||.....:|....:.:: 
 Worm   260 NEKIKKFYNKSTFWAGFFDGLALFVIYFITGISLFFGCRLYFNQE--IGKAGDVILIVNTICVTG 322

  Fly   399 --MNGLSNFYSQLNKGIGASERIWEILDRECSIPIDKGVVPLEKPVGEVGFQNVFFTFPTRPESA 461
              :..|....|.|.:...:...:::.::........:|.:.:....|.:.|::|.|.:.|| ::.
 Worm   323 YFLGLLGPHMSSLQQAATSFLLLYKTIESAPKSEGKEGEIKISSTRGNIEFRDVRFKYFTR-DNE 386

  Fly   462 VLTDFSLNLMPGTTTAVVGRSGSGKTTIALLMLRLYDPQGGTVHLDGIDLRTVNPQWLRNNIGAV 526
            ||...||.::||.|.|:||.||.||:|...|:.:||....|.:.:||.::..::.:.||..||.|
 Worm   387 VLQGLSLQVLPGQTVALVGTSGCGKSTSIGLLTKLYRASEGEILIDGKNIDMLDAKSLRQQIGIV 451

  Fly   527 SQEPVLFSCSIRENILYGANPGETPSPERLQQVIEDANVSQFTDQLPDGLDTLVGQRGMMLSGGQ 591
            .|||.||..:|.|||..|.|..|    |.::...:.||.|.|.::|.:|.:|.:|..|:.|||||
 Worm   452 QQEPKLFDGTIMENIKLGRNVDE----ETIKTAADIANASSFIEKLENGYETRLGPGGVQLSGGQ 512

  Fly   592 KQRVAIARALIKNPAILILDEATSALDAVSENLVQNALDNLIQGRTVLTIAHRLSTIRNADQIAV 656
            |||:.|||||:.:|:||:|||||||||:.:|::|..||....:|||.:.||||||::::.|:|.|
 Worm   513 KQRICIARALVTSPSILLLDEATSALDSHNEHIVNKALTKASEGRTTIIIAHRLSSLKSVDRIYV 577

  Fly   657 LSDGKIVEQGSYNELMGIQEGVFRELVASQ 686
            |..||..|.|:::||: :..|::..|..||
 Worm   578 LDQGKTKEIGTHDELI-LLGGIYARLAKSQ 606

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3156NP_569844.2 MdlB 106..687 CDD:224055 185/615 (30%)
ABC_membrane 127..395 CDD:279056 71/296 (24%)
ABC_MTABC3_MDL1_MDL2 447..686 CDD:213216 103/238 (43%)
pgp-11NP_001364583.1 PTZ00265 38..1235 CDD:240339 184/605 (30%)
MdlB 46..607 CDD:224055 183/597 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100059
Panther 1 1.100 - - O PTHR24221
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.000

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