DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3156 and pgp-4

DIOPT Version :9

Sequence 1:NP_569844.2 Gene:CG3156 / 30994 FlyBaseID:FBgn0023536 Length:692 Species:Drosophila melanogaster
Sequence 2:NP_001257142.1 Gene:pgp-4 / 181327 WormBaseID:WBGene00003998 Length:1280 Species:Caenorhabditis elegans


Alignment Length:610 Identity:196/610 - (32%)
Similarity:305/610 - (50%) Gaps:43/610 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 KMGRSQYGRLLS----LTKSEKWVLTAGIGCLVVSSAITMSVPLFLGKVIDVVFNKSGMDSAAMA 163
            |..||..|..||    .:....::|.  :|.||:|:|....:| |...:.:.:.|.. |...|..
 Worm    33 KKSRSSQGNSLSNLFRHSGCADYLLL--LGGLVLSAANGALLP-FNSLIFEGITNVL-MKGEAQW 93

  Fly   164 KLG--EYSVLLFGI------FVLGGFANFARVHLFGNAAL-----RIVRSLRSRLYRSMLMQEVG 215
            :.|  :|.....||      :.|.|...|...: |.||.|     |.:..:|..|.:|:|.|:..
 Worm    94 QNGTFDYDTFSSGIQHYCLLYFLLGVLMFTCTY-FSNACLFTMAERRLYCIRKHLLQSVLRQDAK 157

  Fly   216 WFDTKGTGELINRLSNDTLMVGTSLSQNVSDGLRSVAMIGVGTGMMIYTSPQLAAVSALVVPAMA 280
            |||....|.|..::|:....:...:...:...:..:|....|..:..|...||..|..:.||...
 Worm   158 WFDENTVGGLTQKMSSGIEKIKDGIGDKIGVLVSGIATFISGVALGFYMCWQLTLVMLVTVPLQL 222

  Fly   281 GMAIVYGRYVRRITKVELDKYAEIMKFAEERFGNVKTVKTFCREQQEVAAFDGKLDEALQIGYKE 345
            |...:..:::.|.||.|:..|:.....|.|....::||..|..:..|:..:..:|.:|.::|.::
 Worm   223 GSMYLSAKHLNRATKNEMSAYSSAGGMANEVIAGIRTVIAFNAQPFEIERYGAQLAKARKMGIRK 287

  Fly   346 TRARAIFFGLTGFCGNFIIISVLYYGGTL----VLQDSLTIGALTAFML---YAGYVAISMNGLS 403
            ....|:...:..|....::....:||..|    |.....|.|...|.:|   ..|..|..|..::
 Worm   288 AIVLALCSAMPLFLMFVLMAGAFWYGAILTSYGVATSGTTFGVFWAVILGTRRLGEAAPHMGAIT 352

  Fly   404 NFYSQLNKGIGASERIWEILDRECSIPIDK--GVVPLEKPVGEVGFQNVFFTFPTRPESAVLTDF 466
            .....:|.       |::::|.|..|...|  |..| :|..|::.|.|:.||:||||:..:|...
 Worm   353 GARLAVND-------IFKVIDHEPEINCTKQEGRRP-DKVNGKLVFDNIQFTYPTRPDVKILKGV 409

  Fly   467 SLNLMPGTTTAVVGRSGSGKTTIALLMLRLYDPQGGTVHLDGIDLRTVNPQWLRNNIGAVSQEPV 531
            |..:.||.|.|:||.||.||:|...|::|.|:...|::.||||.:...|.||||:.||.|.|||:
 Worm   410 SFEVNPGETIALVGHSGCGKSTSIGLLMRFYNQCAGSIKLDGIPIEDYNIQWLRSTIGIVQQEPI 474

  Fly   532 LFSCSIRENILYGANPGETPSPERLQQVIEDANVSQFTDQLPDGLDTLVGQRGMMLSGGQKQRVA 596
            :|..::.||:..|   .::.:.:.::.....||...|..:|.:|.:|::|...:.||||||||||
 Worm   475 IFLATVAENVRMG---DDSITDKDIENACRQANAHDFIGKLSEGYNTVIGAGAVQLSGGQKQRVA 536

  Fly   597 IARALIKNPAILILDEATSALDAVSENLVQNALDNLIQGRTVLTIAHRLSTIRNADQIAVLSDGK 661
            ||||:::.|.||:|||||||||..||.:||.|||...:|||.|.|||||||||||.:|.|...|.
 Worm   537 IARAIVRKPQILLLDEATSALDTESERMVQTALDKASEGRTTLCIAHRLSTIRNASKILVFDQGL 601

  Fly   662 IVEQGSYNELMGIQEGVFRELVASQ 686
            |.|:|.:::|:. |.|::..:|.:|
 Worm   602 IPERGIHDQLIR-QNGIYANMVRAQ 625

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3156NP_569844.2 MdlB 106..687 CDD:224055 195/607 (32%)
ABC_membrane 127..395 CDD:279056 67/287 (23%)
ABC_MTABC3_MDL1_MDL2 447..686 CDD:213216 109/238 (46%)
pgp-4NP_001257142.1 ABC_membrane 65..338 CDD:279056 63/275 (23%)
PTZ00265 68..1276 CDD:240339 184/573 (32%)
ABC_MTABC3_MDL1_MDL2 389..625 CDD:213216 109/239 (46%)
ABC_membrane 724..993 CDD:279056
ABC_MTABC3_MDL1_MDL2 1041..1278 CDD:213216
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100059
Panther 1 1.100 - - O PTHR24221
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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