DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3156 and pgp-4

DIOPT Version :10

Sequence 1:NP_569844.2 Gene:CG3156 / 30994 FlyBaseID:FBgn0023536 Length:692 Species:Drosophila melanogaster
Sequence 2:NP_001257142.1 Gene:pgp-4 / 181327 WormBaseID:WBGene00003998 Length:1280 Species:Caenorhabditis elegans


Alignment Length:610 Identity:196/610 - (32%)
Similarity:305/610 - (50%) Gaps:43/610 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 KMGRSQYGRLLS----LTKSEKWVLTAGIGCLVVSSAITMSVPLFLGKVIDVVFNKSGMDSAAMA 163
            |..||..|..||    .:....::|.  :|.||:|:|....:| |...:.:.:.|.. |...|..
 Worm    33 KKSRSSQGNSLSNLFRHSGCADYLLL--LGGLVLSAANGALLP-FNSLIFEGITNVL-MKGEAQW 93

  Fly   164 KLG--EYSVLLFGI------FVLGGFANFARVHLFGNAAL-----RIVRSLRSRLYRSMLMQEVG 215
            :.|  :|.....||      :.|.|...|...: |.||.|     |.:..:|..|.:|:|.|:..
 Worm    94 QNGTFDYDTFSSGIQHYCLLYFLLGVLMFTCTY-FSNACLFTMAERRLYCIRKHLLQSVLRQDAK 157

  Fly   216 WFDTKGTGELINRLSNDTLMVGTSLSQNVSDGLRSVAMIGVGTGMMIYTSPQLAAVSALVVPAMA 280
            |||....|.|..::|:....:...:...:...:..:|....|..:..|...||..|..:.||...
 Worm   158 WFDENTVGGLTQKMSSGIEKIKDGIGDKIGVLVSGIATFISGVALGFYMCWQLTLVMLVTVPLQL 222

  Fly   281 GMAIVYGRYVRRITKVELDKYAEIMKFAEERFGNVKTVKTFCREQQEVAAFDGKLDEALQIGYKE 345
            |...:..:::.|.||.|:..|:.....|.|....::||..|..:..|:..:..:|.:|.::|.::
 Worm   223 GSMYLSAKHLNRATKNEMSAYSSAGGMANEVIAGIRTVIAFNAQPFEIERYGAQLAKARKMGIRK 287

  Fly   346 TRARAIFFGLTGFCGNFIIISVLYYGGTL----VLQDSLTIGALTAFML---YAGYVAISMNGLS 403
            ....|:...:..|....::....:||..|    |.....|.|...|.:|   ..|..|..|..::
 Worm   288 AIVLALCSAMPLFLMFVLMAGAFWYGAILTSYGVATSGTTFGVFWAVILGTRRLGEAAPHMGAIT 352

  Fly   404 NFYSQLNKGIGASERIWEILDRECSIPIDK--GVVPLEKPVGEVGFQNVFFTFPTRPESAVLTDF 466
            .....:|.       |::::|.|..|...|  |..| :|..|::.|.|:.||:||||:..:|...
 Worm   353 GARLAVND-------IFKVIDHEPEINCTKQEGRRP-DKVNGKLVFDNIQFTYPTRPDVKILKGV 409

  Fly   467 SLNLMPGTTTAVVGRSGSGKTTIALLMLRLYDPQGGTVHLDGIDLRTVNPQWLRNNIGAVSQEPV 531
            |..:.||.|.|:||.||.||:|...|::|.|:...|::.||||.:...|.||||:.||.|.|||:
 Worm   410 SFEVNPGETIALVGHSGCGKSTSIGLLMRFYNQCAGSIKLDGIPIEDYNIQWLRSTIGIVQQEPI 474

  Fly   532 LFSCSIRENILYGANPGETPSPERLQQVIEDANVSQFTDQLPDGLDTLVGQRGMMLSGGQKQRVA 596
            :|..::.||:..|   .::.:.:.::.....||...|..:|.:|.:|::|...:.||||||||||
 Worm   475 IFLATVAENVRMG---DDSITDKDIENACRQANAHDFIGKLSEGYNTVIGAGAVQLSGGQKQRVA 536

  Fly   597 IARALIKNPAILILDEATSALDAVSENLVQNALDNLIQGRTVLTIAHRLSTIRNADQIAVLSDGK 661
            ||||:::.|.||:|||||||||..||.:||.|||...:|||.|.|||||||||||.:|.|...|.
 Worm   537 IARAIVRKPQILLLDEATSALDTESERMVQTALDKASEGRTTLCIAHRLSTIRNASKILVFDQGL 601

  Fly   662 IVEQGSYNELMGIQEGVFRELVASQ 686
            |.|:|.:::|:. |.|::..:|.:|
 Worm   602 IPERGIHDQLIR-QNGIYANMVRAQ 625

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3156NP_569844.2 MdlB 103..687 CDD:440747 196/610 (32%)
pgp-4NP_001257142.1 MdlB 105..628 CDD:440747 177/534 (33%)
MdlB 704..1279 CDD:440747
Blue background indicates that the domain is not in the aligned region.

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