DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3156 and pgp-6

DIOPT Version :10

Sequence 1:NP_569844.2 Gene:CG3156 / 30994 FlyBaseID:FBgn0023536 Length:692 Species:Drosophila melanogaster
Sequence 2:NP_001041287.2 Gene:pgp-6 / 181278 WormBaseID:WBGene00004000 Length:1263 Species:Caenorhabditis elegans


Alignment Length:595 Identity:194/595 - (32%)
Similarity:310/595 - (52%) Gaps:30/595 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 EKWVLTAGIGCLVVSSAITMSVPLFLGKVIDVV------FNKSGMDSAAMAKLGE-----YSVLL 172
            ||::...|:...:::......:....|:|..|:      .|...:|.|.:.|..|     .:.::
 Worm    39 EKFLFLLGVLFSLMTGFCQPFMSYTFGEVSQVLVTITNAINNKTIDPADLEKAYEEYERGMNQVV 103

  Fly   173 FGIFVLG-GFANFARV------HLFGNAALRIVRSLRSRLYRSMLMQEVGWFDTKGTGELINRLS 230
            |..|:.| .:..||.:      ::..|...|:.:...|||    |.::..:||:..||.|...|:
 Worm   104 FHFFLCGCAYFIFASLQHAIMKYVGDNTTYRVRKQYISRL----LKKDAQYFDSVSTGHLSTVLN 164

  Fly   231 NDTLMVGTSLSQNVSDGLRSVAMIGVGTGMMIYTSPQLAAVSALVVPAMAGMAIVYGRYVRRITK 295
            ::........::.::..:..|....:||.:..||..:||:........:|....:....|.:.|.
 Worm   165 DNLERFREVFNEKIALIIAFVTDFTLGTALAFYTDWRLASYGIFFSLGIAFSGFINSAGVMKTTG 229

  Fly   296 VELDKYAEIMKFAEERFGNVKTVKTFCREQQEVAAFDGKLDEALQIGYKETRARAIFFGLTGFCG 360
            .:...||.....|.:..|..|||.:...::.|:..:..:|....:.|.:.....:|..|:|.|..
 Worm   230 KQNTHYANAGSIAFQTLGAYKTVCSLNGQKTEIERYTEELKAGEKYGIRRALMYSISRGVTYFFC 294

  Fly   361 NFIIISVLYYGGTLVLQDSLTIGALTAFMLYAGYVAISMNGLSNFYSQLNKGIGASERIWEILDR 425
            |.:...|||.|.|::...:|....:.....|..:.|..::......|:|...|.::..|.|:|.:
 Worm   295 NSLNTVVLYVGATMIYSGTLETAVVVRLFHYMLFGAFCLSEALPHISRLAGAISSTAPIAEMLIK 359

  Fly   426 ECSIPIDKGVVPLEKPV---GEVGFQNVFFTFPTRPESAVLTDFSLNLMPGTTTAVVGRSGSGKT 487
            :.:: |:|.....:..|   |.:.|:||.|::||||::.||...|.::..|...|:||.|||||:
 Worm   360 DDNV-IEKDETDYDVEVEVNGNISFKNVKFSYPTRPDAQVLKGISFDVQNGECIALVGASGSGKS 423

  Fly   488 TIALLMLRLYDPQGGTVHLDGIDLRTVNPQWLRNNIGAVSQEPVLFSCSIRENILYGANPGETPS 552
            |:..|:|..|:...|.:.:||:||..:|.:.||..||.||||||||:.:|.|||.:| || ....
 Worm   424 TVVQLLLHYYNIDSGNIFIDGMDLNDMNIKRLRRVIGVVSQEPVLFNTTIEENIRFG-NP-NVSL 486

  Fly   553 PERLQQVIEDANVSQFTDQLPDGLDTLVGQRGMMLSGGQKQRVAIARALIKNPAILILDEATSAL 617
            || :...:..||...|....|.|:.|:||:||..||||||||:||||.|::||.||:||||||||
 Worm   487 PE-IYGALRKANAYDFVCSFPKGIKTIVGERGTQLSGGQKQRIAIARTLVRNPKILLLDEATSAL 550

  Fly   618 DAVSENLVQNALDNLIQGRTVLTIAHRLSTIRNADQIAVLSDGKIVEQGSYNELMGIQEGVFREL 682
            |..||.:||.||:|..||||.:.:||||||||||.:|.|:..|:|||.|:::||:. :.||:.:|
 Worm   551 DNESEQVVQKALENASQGRTTIVVAHRLSTIRNASKIIVMQKGEIVEVGNHDELIA-KRGVYNDL 614

  Fly   683 VASQAFGSRN 692
            |.:|...|.:
 Worm   615 VQAQLLESHD 624

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3156NP_569844.2 MdlB 103..687 CDD:440747 192/588 (33%)
pgp-6NP_001041287.2 MdlB 40..622 CDD:440747 192/590 (33%)
MdlB 681..1254 CDD:440747
Blue background indicates that the domain is not in the aligned region.

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