DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3156 and pgp-6

DIOPT Version :9

Sequence 1:NP_569844.2 Gene:CG3156 / 30994 FlyBaseID:FBgn0023536 Length:692 Species:Drosophila melanogaster
Sequence 2:NP_001041287.2 Gene:pgp-6 / 181278 WormBaseID:WBGene00004000 Length:1263 Species:Caenorhabditis elegans


Alignment Length:595 Identity:194/595 - (32%)
Similarity:310/595 - (52%) Gaps:30/595 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 EKWVLTAGIGCLVVSSAITMSVPLFLGKVIDVV------FNKSGMDSAAMAKLGE-----YSVLL 172
            ||::...|:...:::......:....|:|..|:      .|...:|.|.:.|..|     .:.::
 Worm    39 EKFLFLLGVLFSLMTGFCQPFMSYTFGEVSQVLVTITNAINNKTIDPADLEKAYEEYERGMNQVV 103

  Fly   173 FGIFVLG-GFANFARV------HLFGNAALRIVRSLRSRLYRSMLMQEVGWFDTKGTGELINRLS 230
            |..|:.| .:..||.:      ::..|...|:.:...|||    |.::..:||:..||.|...|:
 Worm   104 FHFFLCGCAYFIFASLQHAIMKYVGDNTTYRVRKQYISRL----LKKDAQYFDSVSTGHLSTVLN 164

  Fly   231 NDTLMVGTSLSQNVSDGLRSVAMIGVGTGMMIYTSPQLAAVSALVVPAMAGMAIVYGRYVRRITK 295
            ::........::.::..:..|....:||.:..||..:||:........:|....:....|.:.|.
 Worm   165 DNLERFREVFNEKIALIIAFVTDFTLGTALAFYTDWRLASYGIFFSLGIAFSGFINSAGVMKTTG 229

  Fly   296 VELDKYAEIMKFAEERFGNVKTVKTFCREQQEVAAFDGKLDEALQIGYKETRARAIFFGLTGFCG 360
            .:...||.....|.:..|..|||.:...::.|:..:..:|....:.|.:.....:|..|:|.|..
 Worm   230 KQNTHYANAGSIAFQTLGAYKTVCSLNGQKTEIERYTEELKAGEKYGIRRALMYSISRGVTYFFC 294

  Fly   361 NFIIISVLYYGGTLVLQDSLTIGALTAFMLYAGYVAISMNGLSNFYSQLNKGIGASERIWEILDR 425
            |.:...|||.|.|::...:|....:.....|..:.|..::......|:|...|.::..|.|:|.:
 Worm   295 NSLNTVVLYVGATMIYSGTLETAVVVRLFHYMLFGAFCLSEALPHISRLAGAISSTAPIAEMLIK 359

  Fly   426 ECSIPIDKGVVPLEKPV---GEVGFQNVFFTFPTRPESAVLTDFSLNLMPGTTTAVVGRSGSGKT 487
            :.:: |:|.....:..|   |.:.|:||.|::||||::.||...|.::..|...|:||.|||||:
 Worm   360 DDNV-IEKDETDYDVEVEVNGNISFKNVKFSYPTRPDAQVLKGISFDVQNGECIALVGASGSGKS 423

  Fly   488 TIALLMLRLYDPQGGTVHLDGIDLRTVNPQWLRNNIGAVSQEPVLFSCSIRENILYGANPGETPS 552
            |:..|:|..|:...|.:.:||:||..:|.:.||..||.||||||||:.:|.|||.:| || ....
 Worm   424 TVVQLLLHYYNIDSGNIFIDGMDLNDMNIKRLRRVIGVVSQEPVLFNTTIEENIRFG-NP-NVSL 486

  Fly   553 PERLQQVIEDANVSQFTDQLPDGLDTLVGQRGMMLSGGQKQRVAIARALIKNPAILILDEATSAL 617
            || :...:..||...|....|.|:.|:||:||..||||||||:||||.|::||.||:||||||||
 Worm   487 PE-IYGALRKANAYDFVCSFPKGIKTIVGERGTQLSGGQKQRIAIARTLVRNPKILLLDEATSAL 550

  Fly   618 DAVSENLVQNALDNLIQGRTVLTIAHRLSTIRNADQIAVLSDGKIVEQGSYNELMGIQEGVFREL 682
            |..||.:||.||:|..||||.:.:||||||||||.:|.|:..|:|||.|:::||:. :.||:.:|
 Worm   551 DNESEQVVQKALENASQGRTTIVVAHRLSTIRNASKIIVMQKGEIVEVGNHDELIA-KRGVYNDL 614

  Fly   683 VASQAFGSRN 692
            |.:|...|.:
 Worm   615 VQAQLLESHD 624

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3156NP_569844.2 MdlB 106..687 CDD:224055 192/588 (33%)
ABC_membrane 127..395 CDD:279056 57/285 (20%)
ABC_MTABC3_MDL1_MDL2 447..686 CDD:213216 121/238 (51%)
pgp-6NP_001041287.2 PTZ00265 32..1252 CDD:240339 194/595 (33%)
ABC_membrane 47..331 CDD:294371 57/287 (20%)
ABC_MTABC3_MDL1_MDL2 381..618 CDD:213216 121/240 (50%)
ABC_membrane 699..970 CDD:279056
ABC_MTABC3_MDL1_MDL2 1019..1254 CDD:213216
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162806
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100059
Panther 1 1.100 - - O PTHR24221
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.840

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