DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3156 and pgp-8

DIOPT Version :10

Sequence 1:NP_569844.2 Gene:CG3156 / 30994 FlyBaseID:FBgn0023536 Length:692 Species:Drosophila melanogaster
Sequence 2:NP_509811.2 Gene:pgp-8 / 181277 WormBaseID:WBGene00004002 Length:1243 Species:Caenorhabditis elegans


Alignment Length:607 Identity:201/607 - (33%)
Similarity:309/607 - (50%) Gaps:46/607 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 TKSEKWVLTAGIGCLVVSSAITMSVPLFL----GKV------IDVVFNKSGMDSAAMAKLGEY-- 168
            :|.||::...|    |||:..|.....|:    |:|      |....|.:.:|.:.:.|..|.  
 Worm    33 SKWEKFLFVIG----VVSAICTGLTQPFMSYTFGEVSQAFVRITAAVNNASLDPSDLEKAYEMFH 93

  Fly   169 -----SVLLFGI----FVLGGFANFARVHLFG-NAALRIVRSLRSRLYRSMLMQEVGWFDTKGTG 223
                 .|:.||:    |:..||..|:.....| |...|    ||.:....:|.::..:|||..||
 Worm    94 ADMNNVVIHFGLVGCAFMFFGFIQFSLFKYIGDNTTYR----LRHKFILRLLKKDAKYFDTISTG 154

  Fly   224 ELINRLSNDTLMVGTSLSQNVSDGLRSVAMIGVGTGMMIYTSPQLAAVSALVVPAMAGMAIVYGR 288
            .|...|:::......:.::.::..:.......:||.:..|||..||:..::....:....::...
 Worm   155 YLSTVLNDNLERFREAFNEKIAFIICFSTDFAIGTALAFYTSWTLASYGSVFAFGIVISGLLNST 219

  Fly   289 YVRRITKVELDKYAEIMKFAEERFGNVKTVKTFCREQQEVAAFDGKLDEALQIGYKETRARAIFF 353
            .:.:..:.:...|:.....|.:...:.|||.:...:.||:..:..:|.|..:.|.:    ||.|.
 Worm   220 SMMKSNEKQSMHYSNAGAIAFQALCSFKTVISLNGQTQELEKYSAELKEGEKFGSR----RAFFL 280

  Fly   354 ----GLTGFCGNFIIISVLYYGGTLVLQDSLTIGALTAFMLYAGYVAISMNGLSNFYSQLNKGIG 414
                ||:.|..|.:..::||.|..|:...::...|:.....|..:.|.|:.......|.|...|.
 Worm   281 ATSRGLSHFFCNALNGTILYVGADLIYNKTMNTVAIVTLFHYMLFSAFSLGEAFLHISYLLNAIN 345

  Fly   415 ASERIWEIL---DRECSIPIDKGVVPLEKPV-GEVGFQNVFFTFPTRPESAVLTDFSLNLMPGTT 475
            ::..|:::|   |.......|.......|.: |.:.|.||.|.:|:||:..:|...|.::..|..
 Worm   346 SATPIFDVLTSDDDMIENNQDNEQTDSNKTIQGMLSFNNVKFAYPSRPDVDILRGISFDVKQGEC 410

  Fly   476 TAVVGRSGSGKTTIALLMLRLYDPQGGTVHLDGIDLRTVNPQWLRNNIGAVSQEPVLFSCSIREN 540
            .|:||.|||||:||..|:|..|:.|.||:.:....|..:|.:.|||.||.||||||||:.:|.||
 Worm   411 IALVGASGSGKSTIVQLLLHFYNIQSGTIKIGDSHLHDINLKQLRNAIGVVSQEPVLFNTTIEEN 475

  Fly   541 ILYGANPGETPSPERLQQVIEDANVSQFTDQLPDGLDTLVGQRGMMLSGGQKQRVAIARALIKNP 605
            |.:| ||..|.|  .:.:.:..||...|...:.|||.|:||:||..||||||||:||||.|:|||
 Worm   476 IRFG-NPNATSS--EIYEALRKANAYDFVCNIKDGLKTIVGERGAQLSGGQKQRIAIARVLVKNP 537

  Fly   606 AILILDEATSALDAVSENLVQNALDNLIQGRTVLTIAHRLSTIRNADQIAVLSDGKIVEQGSYNE 670
            |||:|||||||||:.||..||.||....:|||.:.|||||||||:.|:|.|:|:|||.|.||:.|
 Worm   538 AILLLDEATSALDSASERAVQLALKKASEGRTTIIIAHRLSTIRHCDKIMVMSNGKIAEVGSHEE 602

  Fly   671 LMGIQEGVFRELVASQAFGSRN 692
            |:.: :..:..||.:|.|.|::
 Worm   603 LISM-DREYSNLVRAQFFDSQS 623

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3156NP_569844.2 MdlB 103..687 CDD:440747 198/600 (33%)
pgp-8NP_509811.2 MdlB 37..618 CDD:440747 196/596 (33%)
MdlB 667..1240 CDD:440747
Blue background indicates that the domain is not in the aligned region.

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