DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3156 and mrp-4

DIOPT Version :9

Sequence 1:NP_569844.2 Gene:CG3156 / 30994 FlyBaseID:FBgn0023536 Length:692 Species:Drosophila melanogaster
Sequence 2:NP_509658.1 Gene:mrp-4 / 181202 WormBaseID:WBGene00003410 Length:1573 Species:Caenorhabditis elegans


Alignment Length:643 Identity:163/643 - (25%)
Similarity:285/643 - (44%) Gaps:114/643 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 RLLSLTKSEKWVLTAG--------------------------IGCLVVSSAITMSVPLF-LGKVI 148
            |.||.|||....:|:.                          .|.:.:|.|:     || ||...
 Worm   961 RRLSTTKSHTHSITSASTQTRQLTGTERVETGRVKMDTYYKYFGAMGMSIAV-----LFVLGMTT 1020

  Fly   149 DVVFN----------------KSGMDSAAM---AKLGEYS-------VLLF-GIFVLGGFANFAR 186
            ..:|:                :||.::...   .:||.|:       :||| |:..|        
 Worm  1021 STIFSMGRNLWLTDWSNDNAARSGSNTTGQPIAIRLGVYAGLGFSEIILLFIGMLSL-------- 1077

  Fly   187 VHLFGNAALRIVRSLRSRLYRSMLMQEVGWFDTKGTGELINRLSNDTLMVGTSLSQNVSDGLRSV 251
              |:|..:..  |:|.:.|.|::....:.::||...|.::||:..|...|...|..||....:.:
 Worm  1078 --LYGGVSAS--RNLHAPLMRNLFRVPMAFYDTTPFGRILNRIGKDIETVDVLLPFNVQFFAQCL 1138

  Fly   252 AMIGVGTGMMIYTSPQLAAVSALVVPAMAGMAIVYGRYV----RRITKVELDKYAEIMKFAEERF 312
            ..: |.|.::|..|   ..|..:|:..::.|.::..||.    |::.::|....:.|.....|..
 Worm  1139 LQV-VSTLIIIMIS---TPVFGIVIIPLSVMYLMVMRYYIATSRQLKRLESITRSPIYSHLSESI 1199

  Fly   313 GNVKTVKT------FCREQQEVAAFDGKLDEALQIGYKETRARAIFFGLTGFCGNFIII-SVLYY 370
            ....|::.      ||:..:.      |:|..:|..|....|.........|.||.|:: |.|:.
 Worm  1200 QGSATIRAYHLVDRFCKLSET------KVDSHVQCRYLNYVANRWLSVRLEFIGNCIVLFSALFA 1258

  Fly   371 GGTLVLQDSLTIGALTAFMLYAGYVAISMNGLSNF----YSQLNKGIGASERIWEILDRECSI-- 429
            ..|.....|..||...::       |:::..:.||    .::|...|.:.||:.|..:.|...  
 Worm  1259 ALTRTTTTSGVIGLSVSY-------ALNITTVLNFAVRQITKLETNIVSVERVKEYAETETEAEW 1316

  Fly   430 PIDKGVVPLEK--PVGEVGFQNVFFTFPTRPE-SAVLTDFSLNLMPGTTTAVVGRSGSGKTTIAL 491
            ..:.|..|.:.  ..|.:...|  ::...||. :.|:...::.:.|.....:|||:|:||:::.|
 Worm  1317 KSEPGKEPPQNWPSEGRIVMNN--YSARYRPGLNLVVKQLNVEIKPHEKVGIVGRTGAGKSSVTL 1379

  Fly   492 LMLRLYDPQGGTVHLDGIDLRTVNPQWLRNNIGAVSQEPVLFSCSIRENILYGANPGETPSPERL 556
            .:.|:.:...|.:.:|||:|..:....||:|:..:.|:|||||.::|.|:    :|....|...:
 Worm  1380 SLFRIIEAAEGQIVVDGINLAEIGLHDLRSNLTIIPQDPVLFSGTLRFNL----DPFNHYSDGDI 1440

  Fly   557 QQVIEDANVSQFTDQLPDGLDTLVGQRGMMLSGGQKQRVAIARALIKNPAILILDEATSALDAVS 621
            .:.:|.||:.:|.....:.|:.::.:.|..:|.||:|.|.:||||::...:|||||||:|:|..:
 Worm  1441 WKTLEMANLKEFATAHNEQLNYIITEGGDNISVGQRQLVCLARALLRKTRVLILDEATAAVDVST 1505

  Fly   622 ENLVQNALDNLIQGRTVLTIAHRLSTIRNADQIAVLSDGKIVEQGSYNELMGIQEGVF 679
            :.|:|..:.......|||||||||:||.:.|:|.||:|||:.|..|...|:..:...|
 Worm  1506 DALIQKTIREEFANATVLTIAHRLNTIMDYDRIIVLNDGKVGEFDSPANLLSNRNSEF 1563

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3156NP_569844.2 MdlB 106..687 CDD:224055 163/643 (25%)
ABC_membrane 127..395 CDD:279056 65/306 (21%)
ABC_MTABC3_MDL1_MDL2 447..686 CDD:213216 79/234 (34%)
mrp-4NP_509658.1 MRP_assoc_pro 17..1572 CDD:188098 163/643 (25%)
ABC_membrane 346..613 CDD:294371
ABCC_MRP_domain1 658..862 CDD:213217
ABC_membrane 1012..1259 CDD:294371 58/273 (21%)
ABCC_MRP_domain2 1332..1552 CDD:213211 77/225 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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