DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3156 and mrp-6

DIOPT Version :9

Sequence 1:NP_569844.2 Gene:CG3156 / 30994 FlyBaseID:FBgn0023536 Length:692 Species:Drosophila melanogaster
Sequence 2:NP_001362008.1 Gene:mrp-6 / 180691 WormBaseID:WBGene00003412 Length:1415 Species:Caenorhabditis elegans


Alignment Length:647 Identity:157/647 - (24%)
Similarity:292/647 - (45%) Gaps:84/647 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 KMGRSQYGRLL--------SLTKSEKWVLTAG-----------IGCLVVSSAITMSVPLFLGK-V 147
            ||..::|.:.:        :::.|..|..|.|           :.|::::..:...|..:|.| :
 Worm   773 KMSETEYVKEIVYESRKSGTISWSVYWEYTRGVINPLKYGIWLVVCVLITQLMNNFVDWWLNKWL 837

  Fly   148 IDVVFNKSGMDSAAMAK--------LG--------EYSVLLFGIFVLGGFANFARVHLFGNAALR 196
            :|:..|.:  |::...:        ||        .|.:......|:.......|...|.||.|.
 Worm   838 VDLDMNNA--DNSTSKEEFNRNVDVLGYTFNVTFQTYELTFIISTVIMSILGVVRSVWFRNAQLM 900

  Fly   197 IVRSLRSRLYRSMLMQEVGWFDTKGTGELINRLSNDTLMVGTSLSQNVSDGL-RSVAMIGVGTGM 260
            ..|.|.:.::..:|..|..:||....|.::||.|.|..:....|:....:.: .::..:|: .|:
 Worm   901 ASRILHNSMFDCVLKTESEFFDKNSEGMILNRFSKDIGLTDDLLAFTYFEFVFGTLTFVGI-VGL 964

  Fly   261 MIYTSPQLAAVSALVVPAMAGMAIVYGRYV---RRITKVELDKYAEIMKFAEERFGNVKTVKTFC 322
            :....|.:....|.:.   ||.......||   |.:.::|....:.:..........:.|::.:.
 Worm   965 VSMVRPIVILACAFIT---AGFYFCRKMYVHRSRELKRIEAAARSPLNTTITSTVHGLSTIRAYR 1026

  Fly   323 REQQEVAAFDGKLDEALQIGYKETRARAIFFGLTGFCGNFII-ISVLYYGGTLVLQ-DSLTIGAL 385
            :|.:.:..|.. |.:.....|......|.:||:   |.:|:: :.|......:||| ::||:|.:
 Worm  1027 KENEMIEKFCA-LHDVYMAAYNMGLLSARWFGI---CIDFLVSVFVSIVAIVVVLQYETLTVGEV 1087

  Fly   386 TAFMLYAGYVAISMNGLSNFYS-------QLNKGIGASERIWEIL----DRECSIP----IDKGV 435
                   |...:....||.|:|       :|..|:.:.||:.|..    :.|...|    :||.:
 Worm  1088 -------GLCLVCAVQLSGFFSWIMRQSAELENGMVSVERVLEYTKLKSEEEARRPHDAYLDKQL 1145

  Fly   436 VPLEKPVGEVGFQNVFFTFPTRPESAVLTDFSLNLMPGTTTAVVGRSGSGKTTIALLMLRLYDPQ 500
            :......||:.|:||...:   .|:.||.:.|..::.|....||||:|:||:|:..::..|.:..
 Worm  1146 LNSWPTKGEIEFENVSVNY---GETKVLKNLSFVVLGGQKIGVVGRTGAGKSTLIKIIFGLKEYC 1207

  Fly   501 GGTVHLDGIDLRTVNPQWLRNNIGAVSQEPVLFSCSIRENILYGANPGETPSPERLQQVIEDANV 565
            .|.|.:||:||..::..:.|..:..:.||||:||.::|||:    :|.:......:...:|...:
 Worm  1208 SGRVTIDGVDLDHISLNFRRGGMSIIPQEPVIFSGTVRENL----DPFDEYDDATIWFALEQCEL 1268

  Fly   566 SQFTDQLPDGLDTLVGQRGMMLSGGQKQRVAIARALIKNPAILILDEATSALDAVSENLVQNALD 630
            .:...: ..||:..:||||:.||.||:|...:|||:|....||::||||:.:|.|::..:|..:.
 Worm  1269 KRSITK-EKGLNVELGQRGVSLSVGQRQLFCLARAMIHRSKILVIDEATANVDGVTDACIQKTIR 1332

  Fly   631 NLIQGRTVLTIAHRLSTIRNADQIAVLSDGKIVEQGSYNELMGIQEGVFRELVASQAFGSRN 692
            :..:..|::|:||||.||.|:|.:.|...|::||......|:..|..:|..:.|..  |:.|
 Worm  1333 DFFKNATIITVAHRLHTIMNSDNVMVFEKGELVEFDKPITLLDDQSSLFSRMAAQS--GAEN 1392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3156NP_569844.2 MdlB 106..687 CDD:224055 153/637 (24%)
ABC_membrane 127..395 CDD:279056 56/290 (19%)
ABC_MTABC3_MDL1_MDL2 447..686 CDD:213216 77/238 (32%)
mrp-6NP_001362008.1 MRP_assoc_pro <126..1389 CDD:188098 155/642 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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