DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3156 and pgp-9

DIOPT Version :9

Sequence 1:NP_569844.2 Gene:CG3156 / 30994 FlyBaseID:FBgn0023536 Length:692 Species:Drosophila melanogaster
Sequence 2:NP_507487.1 Gene:pgp-9 / 180165 WormBaseID:WBGene00004003 Length:1294 Species:Caenorhabditis elegans


Alignment Length:655 Identity:219/655 - (33%)
Similarity:337/655 - (51%) Gaps:58/655 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 RRGFAQSSKWLARNAKANLPTAVG-----AGIVPAP---------VKMGRSQYG-------RLLS 114
            ||...|:|:   |....|..|...     .|..|||         :|....:.|       ::|.
 Worm   636 RRMSRQTSQ---RKGSVNFKTQESQVDEKPGAPPAPEAAEKEIKRLKKELEEEGAVKANLFKILR 697

  Fly   115 LTKSEKWV-LTAGIGCLVVSSAITMSVPLFLGKVIDVVFNKSGMDSAAMAKLGEYSVLLFGIF-V 177
            ..:.| |: :...|...::..|:..:..||..::|:|..|.   |...|.|.|.:..|:|.:. .
 Worm   698 YARPE-WIYIFFAIIAALIQGAVMPAFSLFFSQIINVFSNP---DRDQMKKDGHFWALMFLVLAA 758

  Fly   178 LGGFANFARVHLFGNAALRIVRSLRSRLYRSMLMQEVGWFD--TKGTGELINRLSNDTLMVGTSL 240
            :.|.:...:..|||.||.|:...:||::||::|.|:..:||  ....|.:..||:.|...:.:::
 Worm   759 VQGTSMLFQCSLFGVAAERLTMRIRSKVYRNVLRQDATYFDMPKHSPGRITTRLATDAPNIKSAI 823

  Fly   241 SQNVSDGLRSVAMIGVGTGMMIYTSPQLAAVSALVVPAMA-GMAIVYGRYVRRITKVELDKYAEI 304
            ...:.....::|.:|.|.|:..|...|:|.:...:.|.|| |.|::. :|.......:..:....
 Worm   824 DYRLGSIFNAIASVGGGLGIAFYYGWQMAFLVMAIFPFMAVGQALMM-KYHGGSATSDAKEMENA 887

  Fly   305 MKFAEERFGNVKTVKTFCREQQEVAAFDGKLDEALQIGYKETRARAIFFGLT-GFCGN---FIII 365
            .|.|.|...|::||:....:.:....|...||..    :....::||..||| ||..:   |...
 Worm   888 GKTAMEAIENIRTVQALTLQTKLYNIFCSHLDAP----HGGNISKAIIRGLTYGFANSIQFFTYA 948

  Fly   366 SVLYYGGTLVLQDSL------TIGALTAFMLYAGYVAISMNGLSNFYSQLNKGIGASERIWEILD 424
            :...:|..|:...::      .:..|.|.....|.:..:    ::::.:..|...|:..|:.:|:
 Worm   949 AAFRFGLFLIFDKNVLMEPENVLRVLFAISFSFGTIGFA----ASYFPEYIKATFAAGLIFNMLE 1009

  Fly   425 RECSIP--IDKGVVPLEKPVGEVGFQNVFFTFPTRPESAVLTDFSLNLMPGTTTAVVGRSGSGKT 487
            .|..|.  ...|..|  :..|||....|||.:|.||...:|...::::.||.|.|:||.||.||:
 Worm  1010 EEPRIDGMTSSGTYP--QLSGEVKLNKVFFRYPERPAVPILQGLNVHVKPGQTLALVGPSGCGKS 1072

  Fly   488 TIALLMLRLYDPQGGTVHLDGIDLRTVNPQWLRNNIGAVSQEPVLFSCSIRENILYGANPGETPS 552
            |:..|:.|||||..|.|.:|..|||.:||:.||.:|..|||||:||..||||||:||..|||. :
 Worm  1073 TVISLLERLYDPLEGAVTVDNNDLRQMNPKHLRKHIALVSQEPILFDTSIRENIVYGLQPGEY-T 1136

  Fly   553 PERLQQVIEDANVSQFTDQLPDGLDTLVGQRGMMLSGGQKQRVAIARALIKNPAILILDEATSAL 617
            .|:::.....||:.:|.|:||||.:|.||::|..||||||||:|||||||:||.||:||||||||
 Worm  1137 HEQIETACSKANIHKFIDELPDGYETRVGEKGTQLSGGQKQRIAIARALIRNPKILLLDEATSAL 1201

  Fly   618 DAVSENLVQNALDNLIQGRTVLTIAHRLSTIRNADQIAVLSDGKIVEQGSYNELMGIQEGVFREL 682
            |..||..||.|||...:.||.:.:|||||||.||..|.|:.:|::||||::|||:. :.|.:..|
 Worm  1202 DTESEKQVQVALDAAAKDRTCIVVAHRLSTIVNAGCIMVVKNGQVVEQGTHNELIA-KRGAYFAL 1265

  Fly   683 VASQA 687
            ...|:
 Worm  1266 TQKQS 1270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3156NP_569844.2 MdlB 106..687 CDD:224055 206/604 (34%)
ABC_membrane 127..395 CDD:279056 67/281 (24%)
ABC_MTABC3_MDL1_MDL2 447..686 CDD:213216 124/238 (52%)
pgp-9NP_507487.1 PTZ00265 28..1262 CDD:240339 217/645 (34%)
ABC_membrane 50..334 CDD:279056
ABC_MTABC3_MDL1_MDL2 383..620 CDD:213216
ABC_membrane 710..977 CDD:279056 65/274 (24%)
ABC_MTABC3_MDL1_MDL2 1030..1269 CDD:213216 125/240 (52%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162804
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100059
Panther 1 1.100 - - O PTHR24221
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.840

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