DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3156 and haf-3

DIOPT Version :9

Sequence 1:NP_569844.2 Gene:CG3156 / 30994 FlyBaseID:FBgn0023536 Length:692 Species:Drosophila melanogaster
Sequence 2:NP_506927.2 Gene:haf-3 / 180056 WormBaseID:WBGene00001813 Length:666 Species:Caenorhabditis elegans


Alignment Length:644 Identity:259/644 - (40%)
Similarity:378/644 - (58%) Gaps:42/644 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 GFAQSSKWLARNAKANLPTAVGAGIVPAPVKMGRSQY----------GRLLSLTKSEKWVLTAGI 127
            ||.:|:...::.|..|:          :.|:..|..|          ..:|||....||.:..||
 Worm    37 GFLKSTLIKSKQAFRNV----------SVVETKRESYKLKNASWKDLKAILSLAGPYKWRIMLGI 91

  Fly   128 GCLVVSSAITMSVPLFLGKVIDV--VFNKSGMDSAAMAKL-----GEYSVLLFGIFVLGGFANFA 185
            ..|.:||:|.:..|..|||:||.  ...:..||....|.|     .|..:.|.|:|:||..|..|
 Worm    92 SFLGISSSIFLFTPRVLGKLIDEWDETKQDKMDPNDKALLLARFFKENPIALAGVFMLGAIAIAA 156

  Fly   186 RVHLFGNAALRIVRSLRSRLYRSMLMQEVGWFDTKGTGELINRLSNDTLMVGTSLSQNVSDGLRS 250
            |::....|...::..||..::.|:|.|::.:||....||:::|||.|.|:||.|:|.|:|||.|:
 Worm   157 RIYCMHTAGQLVINDLRKSVFNSVLRQDMAFFDKNKVGEIVSRLSTDALIVGYSVSMNLSDGARA 221

  Fly   251 -VAMIGVGTGMMIYTSPQLAAVSALVVPAMAGMAIVYGRYVRRITKVELDKYAEIMKFAEERFGN 314
             :...|.| |:|:|||..:..|..:|||.:.|...|:|:..|:.|.:..:..|...:.|.||..:
 Worm   222 LITCFGSG-GLMVYTSLAMCKVIFVVVPVIVGTFAVFGKLQRKYTLMMQEAVAGANQVATERLSS 285

  Fly   315 VKTVKTFCREQQEVAAFDGKLDEALQIGYKETRARAIFFGLTGFCGNFIIISVLYYGGTLVLQDS 379
            |:||:....|::|:||:..|::|..||..||..|:...||...|.|...:.|:|:||..|:.|..
 Worm   286 VRTVRMLVAERKELAAYSDKINEIWQISKKEGLAKGFMFGSFQFTGYLALSSILFYGSNLISQGL 350

  Fly   380 LTIGALTAFMLYAGYVAISMNGLSNFYSQLNKGIGASERIWEILDRECSIPIDKGVVPLEKPVGE 444
            ||.|.|::|.|||...|.|::.:|.||.:|.||:|||.|::|:.:||..||::.||     .:|.
 Worm   351 LTYGELSSFCLYAVLSAGSLSAMSGFYLELMKGLGASSRLFELKNREPRIPLEGGV-----QIGN 410

  Fly   445 V----GFQNVFFTFPTRPESAVLTDFSLNLMPGTTTAVVGRSGSGKTTIALLMLRLYDPQGGTVH 505
            |    .|::|.|.:..|  ..:..:.|.::..|..|||||.|||||:|||.|:||||||..|.:.
 Worm   411 VKDTIRFEHVAFGYADR--DPLFHNISFDVPAGKITAVVGSSGSGKSTIASLLLRLYDPTSGRIL 473

  Fly   506 LDGIDLRTVNPQWLRNNIGAVSQEPVLFSCSIRENILYGANPGETPSPERLQQVIEDANVSQFTD 570
            :||.||:.::|.:.|.:||.|.|||||||.:|:|||:||:...|..:...:....:.:|..:|..
 Worm   474 VDGTDLKDIDPSYWRRHIGTVGQEPVLFSTTIKENIIYGSLEPENVTDAEIVSAADQSNADEFIS 538

  Fly   571 QLPDGLDTLVGQRGMMLSGGQKQRVAIARALIKNPAILILDEATSALDAVSENLVQNALDNLIQG 635
            :.|...||.||:.|..||||||||:||||||:..|.|||:|||||||||.||.||:.||:.|:..
 Worm   539 RFPIKYDTKVGEHGSTLSGGQKQRIAIARALVNKPNILIMDEATSALDASSEYLVRIALNKLLAN 603

  Fly   636 --RTVLTIAHRLSTIRNADQIAVLSDGKIVEQGSYNELMGIQEGVFRELVASQAFGSRN 692
              :||:.||||||||::||||.|:..|.:.|.|||:||:.|.:|:||:||..|.||.:|
 Worm   604 SKQTVMIIAHRLSTIKHADQIVVVDRGSVAESGSYDELIAIPDGIFRKLVEKQTFGFKN 662

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3156NP_569844.2 MdlB 106..687 CDD:224055 249/604 (41%)
ABC_membrane 127..395 CDD:279056 100/275 (36%)
ABC_MTABC3_MDL1_MDL2 447..686 CDD:213216 120/240 (50%)
haf-3NP_506927.2 MdlB 70..657 CDD:224055 247/594 (42%)
ABC_membrane 96..366 CDD:279056 98/270 (36%)
P-loop_NTPase 415..656 CDD:304359 120/242 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 166 1.000 Domainoid score I2352
eggNOG 1 0.900 - - E2759_KOG0058
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6474
Inparanoid 1 1.050 433 1.000 Inparanoid score I956
Isobase 1 0.950 - 0 Normalized mean entropy S1123
OMA 1 1.010 - - QHG54509
OrthoDB 1 1.010 - - D221577at33208
OrthoFinder 1 1.000 - - FOG0000243
OrthoInspector 1 1.000 - - otm14595
orthoMCL 1 0.900 - - OOG6_100059
Panther 1 1.100 - - O PTHR24221
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1969
SonicParanoid 1 1.000 - - X2387
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1615.860

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