DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3156 and haf-1

DIOPT Version :9

Sequence 1:NP_569844.2 Gene:CG3156 / 30994 FlyBaseID:FBgn0023536 Length:692 Species:Drosophila melanogaster
Sequence 2:NP_503098.2 Gene:haf-1 / 178522 WormBaseID:WBGene00001811 Length:677 Species:Caenorhabditis elegans


Alignment Length:572 Identity:226/572 - (39%)
Similarity:346/572 - (60%) Gaps:15/572 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 KWVLTAGIGCLVVSSAITMSVPLFLGKVIDVVFNKSGMDSAA---MAKLGEY----SVLLFGIFV 177
            ||:. .|...:||||.|.:.:|..|||:||...:.:|:..|.   ..|:.:|    .:.|.|:..
 Worm    83 KWIF-LGTSFMVVSSGIFLIIPRILGKLIDQFDSNTGVQKAEEVFTMKIAKYFKEQPMSLVGLLA 146

  Fly   178 LGGFANFARVHLFGNAALRIVRSLRSRLYRSMLMQEVGWFDTKGTGELINRLSNDTLMVGTSLSQ 242
            :|..|..|:|:....|.:.||.|||..:|.|::.|::.:||....||:.:|.:.||::||.|:|.
 Worm   147 IGALATAAKVYCLQIAGVNIVGSLRKMVYSSIIRQDMTFFDKNMVGEIGSRHAADTVIVGYSVSS 211

  Fly   243 NVSDGLRSVAMIGVGT-GMMIYTSPQLAAVSALVVPAMAGMAIVYGRYVRRITKVELDKYAEIMK 306
            ::..|:|:| ::|||: |||:.||.:|:.||.|..|.:.|:..::||..::.|....:..|::.:
 Worm   212 SLRAGVRAV-LVGVGSIGMMLMTSLELSTVSFLTAPIVMGIFKMFGRVQQQCTWQLQEVAADVNQ 275

  Fly   307 FAEERFGNVKTVKTFCREQQEVAAFDGKLDEALQIGYKETRARAIFFGLTGFCGNFIIISVLYYG 371
            .|.||..|:||::....|||.:..:..|.:..|.|...|..|:....|...|.|.....|:|:||
 Worm   276 TAIERMANMKTIRMLSAEQQSIDEYCKKGELVLDISKTEALAKGSLIGSFQFTGYSAFSSILFYG 340

  Fly   372 GTLVLQDSLTIGALTAFMLYAGYVAISMNGLSNFYSQLNKGIGASERIWEILDRECSIPIDKGVV 436
            ..|:....:|.|.|::|.|||...|.|::.:|.||:::.||:|||.|:.|:.:.:..:.::.|:.
 Worm   341 SHLINTGHITYGELSSFCLYAVLAAASLSNISGFYNEVMKGLGASSRLLELKNAQPIMNLNSGIK 405

  Fly   437 PLEKPVGEVGFQNVFFTFPTRPESAVLTDFSLNLMPGTTTAVVGRSGSGKTTIALLMLRLYDPQG 501
            ..:... .:.|:||.|.:..|.::  |.:.|.::..|..|||:|.|||||::||.||||||||..
 Worm   406 KTDITT-SIQFENVSFAYAGRKKT--LENISFDIPRGKITAVIGPSGSGKSSIANLMLRLYDPAD 467

  Fly   502 GTVHLDGIDLRTVNPQWLRNNIGAVSQEPVLFSCSIRENILYGANPGETPSPERLQQVIEDANVS 566
            |.|.:||:|||.:|....|:.||.|.||||||:||||||||.|....|..|...|::..:.||..
 Worm   468 GRVTVDGVDLRDLNATTWRHAIGTVGQEPVLFTCSIRENILMGTEHPEKVSQYELEEAAQLANAL 532

  Fly   567 QFTDQLPDGLDTLVGQRGMMLSGGQKQRVAIARALIKNPAILILDEATSALDAVSENLVQNALDN 631
            .|.....:|.:|:||:.|..||||||||:|||||||..|.|:|||||||||||.|:.|::..|||
 Worm   533 DFIQGFENGFETMVGEHGCKLSGGQKQRIAIARALISKPKIMILDEATSALDATSDYLIRMTLDN 597

  Fly   632 LIQGR--TVLTIAHRLSTIRNADQIAVLSDGKIVEQGSYNELMGIQEGVFRE 681
            |::..  |||.|||||:|::.|||:..::.|:|..||:::|:|.||..:..:
 Worm   598 LLKNHNLTVLVIAHRLATMQQADQVVYVNRGRIEGQGTFDEMMKIQNSIVEQ 649

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3156NP_569844.2 MdlB 106..687 CDD:224055 226/572 (40%)
ABC_membrane 127..395 CDD:279056 91/275 (33%)
ABC_MTABC3_MDL1_MDL2 447..686 CDD:213216 119/237 (50%)
haf-1NP_503098.2 MdlB 82..641 CDD:224055 223/562 (40%)
ABC_membrane 93..363 CDD:294371 91/270 (34%)
P-loop_NTPase 413..641 CDD:304359 116/229 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 166 1.000 Domainoid score I2352
eggNOG 1 0.900 - - E2759_KOG0058
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6474
Inparanoid 1 1.050 433 1.000 Inparanoid score I956
Isobase 1 0.950 - 0 Normalized mean entropy S1123
OMA 1 1.010 - - QHG54509
OrthoDB 1 1.010 - - D221577at33208
OrthoFinder 1 1.000 - - FOG0000243
OrthoInspector 1 1.000 - - otm14595
orthoMCL 1 0.900 - - OOG6_100059
Panther 1 1.100 - - O PTHR24221
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2387
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1413.830

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