DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3156 and pgp-2

DIOPT Version :9

Sequence 1:NP_569844.2 Gene:CG3156 / 30994 FlyBaseID:FBgn0023536 Length:692 Species:Drosophila melanogaster
Sequence 2:NP_001300410.1 Gene:pgp-2 / 172262 WormBaseID:WBGene00003996 Length:1296 Species:Caenorhabditis elegans


Alignment Length:601 Identity:198/601 - (32%)
Similarity:305/601 - (50%) Gaps:40/601 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 GAGIVPAPVKMGRSQYGRLLSLTKSEKWVLTAGIGCLVVSSAITMSVPLFLGKVIDVVFNKSGMD 158
            |||.....:.:|    |......:::......|:..:.....:.:|:..|..:|:          
 Worm    68 GAGFPLLAIVLG----GMTTVFLRAQNSDFVVGVDNVNPEGLVPISLDEFNSEVV---------- 118

  Fly   159 SAAMAKLGEYSVLLFGIFVLGGFANFARVHLFGNAALRIVRSLRSRLYRSMLMQEVGWFDTKGTG 223
                    :|.:....:.||..|.::.::..|.:.|.|:|..||....:::|.|::.|||.:.||
 Worm   119 --------KYCIYYLVLGVLMFFTSYVQIACFESYAERLVHKLRQNYLKAILRQQIQWFDKQQTG 175

  Fly   224 ELINRLSNDTLMVGTSLSQNVSDGLRSVAMIGVGTGMMIYTSPQLAAVSALVVPAMAGMAIVYGR 288
            .|..||::|...|...|....:..::..|....|.|:..:.|..:    .||:...|.:.::.|.
 Worm   176 NLTARLTDDLERVREGLGDKFALLVQMFAAFLAGYGVGFFYSWSM----TLVMMGFAPLIVLSGA 236

  Fly   289 YVRRI----TKVELDKYAEIMKFAEERFGNVKTVKTFCREQQEVAAFDGKLDEALQIGYKETRAR 349
            .:.:.    |:||.:.||.....|||.|.:::||.:....::|:..|...|:...|.|..:....
 Worm   237 KMSKSMATRTRVEQETYAVAGAIAEETFSSIRTVHSLNGHKRELDRFYNALEVGRQTGIVKYCYM 301

  Fly   350 AIFFGLTGFCGNFIIISVLYYGGTLVLQDSLTIGAL---TAFMLYAGYVAISMNGLSNFYSQLNK 411
            .|..|.:..|.........:||.||::.|......|   ..|.:.:|  :.|:.|.....:....
 Worm   302 GIGVGFSNLCMYSSYALAFWYGSTLIINDPTFDRGLIFTVFFAVLSG--STSLGGALPHLASFGT 364

  Fly   412 GIGASERIWEILDRECSI-PIDKGVVPLEKPVGEVGFQNVFFTFPTRPESAVLTDFSLNLMPGTT 475
            ..||:..:..:::....| |.....:.::...|::.|::|.|.:|:|.:..||...||.|..|..
 Worm   365 ARGAASTVLRVINSHPKIDPYSLEGILVDNMKGDISFKDVHFRYPSRKDIHVLKGISLELKAGDK 429

  Fly   476 TAVVGRSGSGKTTIALLMLRLYDPQGGTVHLDGIDLRTVNPQWLRNNIGAVSQEPVLFSCSIREN 540
            .|:||.||.||:||..|:.|.|||..|.|.:||:|||.||...||..||.||||||||..:|.||
 Worm   430 IALVGSSGCGKSTIVNLLQRFYDPTKGRVLIDGVDLREVNVHSLREQIGIVSQEPVLFDGTIYEN 494

  Fly   541 ILYGANPGETPSPERLQQVIEDANVSQFTDQLPDGLDTLVGQRGMMLSGGQKQRVAIARALIKNP 605
            |..|   .|..:.:::.:..:.||.:.|..:||||..|.||::|:.||||||||:||||||:|||
 Worm   495 IKMG---NEHATHDQVVEACKMANANDFIKRLPDGYGTRVGEKGVQLSGGQKQRIAIARALVKNP 556

  Fly   606 AILILDEATSALDAVSENLVQNALDNLIQGRTVLTIAHRLSTIRNADQIAVLSDGKIVEQGSYNE 670
            .||:|||||||||..:|..||.|||....|||.:.:|||||||||.|:|.|...|.|||.||:.|
 Worm   557 KILLLDEATSALDTEAEREVQGALDQAQAGRTTIIVAHRLSTIRNVDRIFVFKAGNIVESGSHEE 621

  Fly   671 LMGIQEGVFRELVASQ 686
            ||. ::|:|.::..:|
 Worm   622 LMS-KQGIFYDMTQAQ 636

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3156NP_569844.2 MdlB 106..687 CDD:224055 194/589 (33%)
ABC_membrane 127..395 CDD:279056 61/274 (22%)
ABC_MTABC3_MDL1_MDL2 447..686 CDD:213216 123/238 (52%)
pgp-2NP_001300410.1 PTZ00265 56..1286 CDD:240339 198/601 (33%)
ABC_membrane 61..349 CDD:279056 67/308 (22%)
ABC_MTABC3_MDL1_MDL2 399..632 CDD:213216 123/236 (52%)
ABC_membrane 736..999 CDD:279056
ABC_MTABC3_MDL1_MDL2 1052..1290 CDD:213216
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100059
Panther 1 1.100 - - O PTHR24221
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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