DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3156 and haf-4

DIOPT Version :9

Sequence 1:NP_569844.2 Gene:CG3156 / 30994 FlyBaseID:FBgn0023536 Length:692 Species:Drosophila melanogaster
Sequence 2:NP_001021666.1 Gene:haf-4 / 171639 WormBaseID:WBGene00001814 Length:787 Species:Caenorhabditis elegans


Alignment Length:600 Identity:209/600 - (34%)
Similarity:327/600 - (54%) Gaps:48/600 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 RLLSLTKSEKWVL-TAGIGCLVVSSAITMSVPLFLGKVI-DVVFNKSGMDSAAMAKLGEYSVLLF 173
            |||...|.| |:. .:|...|.:.|...:.||.:.|:|| .||..||            |..|..
 Worm   170 RLLQYCKRE-WLWHISGFSWLFIYSITRIFVPYYTGQVIATVVATKS------------YPALSN 221

  Fly   174 GIFVL----------GGFANFARVHLFGNAALRIVRSLRSRLYRSMLMQEVGWFDTKGTGELINR 228
            .::::          .||    |...|..|..||.|::|..|:..::.|:|.::|...|||:.:|
 Worm   222 AVYIMTIISLVSAVAAGF----RGGSFEYAYARIQRAIRYDLFHGLVKQDVAFYDAHKTGEVTSR 282

  Fly   229 LSNDTLMVGTSLSQNVSDGLRSVAMIGVGTGMMIY---TSPQLAAVSALVVPAMAGMAIVYGRYV 290
            |:.|...:..:::.||:..||:..|:   .|.||:   .|.:|:.|:.::||.:...:.::|.|.
 Worm   283 LAADCQTMSDTVALNVNVFLRNCVML---LGSMIFMMKLSWRLSLVTFILVPIIFVASKIFGTYY 344

  Fly   291 RRITKVELDKYAEIMKFAEERFGNVKTVKTFCREQQEVAAFDGKLDEALQIGYKETRARAI---- 351
            ..:::...|..||....|||....::||::|..|..|...|.|||...|.:    ||.:||    
 Worm   345 DLLSERTQDTIAESNDVAEEVLSTMRTVRSFSCENVEADRFYGKLTHTLDV----TRTKAIAYIG 405

  Fly   352 FFGLTGFCGNFIIISVLYYGGTLVLQDSLTIGALTAFMLYAGYVAISMNGLSNFYSQLNKGIGAS 416
            |..::....:|||:|||:|||.|||...:....|.:|:||...:..::..:...::.|.:.:|||
 Worm   406 FLWVSELFQSFIIVSVLWYGGHLVLTQKMKGDLLVSFLLYQMQLGDNLRQMGEVWTGLMQSVGAS 470

  Fly   417 ERIWEILDRECSIPIDKGVVPLEKPVGEVGFQNVFFTFPTRPESAVLTDFSLNLMPGTTTAVVGR 481
            .:::|.:|||..|..:...:| |..||::.|:||.|::|||.:..:|.|.|..:.||.|.|:||.
 Worm   471 RKVFEYIDREPQIQHNGEYMP-ENVVGKIEFRNVHFSYPTRSDQPILKDLSFTVEPGETVALVGP 534

  Fly   482 SGSGKTTIALLMLRLYDPQGGTVHLDGIDLRTVNPQWLRNNIGAVSQEPVLFSCSIRENILYGAN 546
            |||||::...|:...|.|..|.|.:||:.|......::...|..|.||||||:.|:.||:.||..
 Worm   535 SGSGKSSCISLLENFYVPNAGQVLVDGVPLEEFEHHYIHKKIALVGQEPVLFARSVMENVRYGVE 599

  Fly   547 PGETPSPERLQQVIEDANVSQFTDQLPDGLDTLVGQRGMMLSGGQKQRVAIARALIKNPAILILD 611
            ..:|    .:.:..|.||...|..|.....:|.||::|..:|||||||:||||||::.||||:||
 Worm   600 VADT----EIIRSCEMANAHGFIMQTTLKYETNVGEKGTQMSGGQKQRIAIARALVREPAILLLD 660

  Fly   612 EATSALDAVSENLVQNALDNLIQGRTVLTIAHRLSTIRNADQIAVLSDGKIVEQGSYNELMGIQE 676
            |||||||..||:|||.|:...:.|::|:.|||||||:..||:|.|::.|::.:.|::..|:....
 Worm   661 EATSALDTESEHLVQEAIYKNLDGKSVILIAHRLSTVEKADKIVVINKGRVEQIGNHETLLKDTN 725

  Fly   677 GVFRELVASQAFGSR 691
            |.:.:||..|..|.:
 Worm   726 GTYAKLVQRQMMGDQ 740

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3156NP_569844.2 MdlB 106..687 CDD:224055 207/594 (35%)
ABC_membrane 127..395 CDD:279056 84/285 (29%)
ABC_MTABC3_MDL1_MDL2 447..686 CDD:213216 103/238 (43%)
haf-4NP_001021666.1 3a01208 16..732 CDD:273363 205/590 (35%)
ABC_membrane 189..449 CDD:279056 84/282 (30%)
ABC_MTABC3_MDL1_MDL2 498..735 CDD:213216 103/240 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 44 1.000 Domainoid score I8332
eggNOG 1 0.900 - - E2759_KOG0058
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54509
OrthoDB 1 1.010 - - D684058at2759
OrthoFinder 1 1.000 - - FOG0000243
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100059
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.730

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