DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3156 and Abcc5

DIOPT Version :9

Sequence 1:NP_569844.2 Gene:CG3156 / 30994 FlyBaseID:FBgn0023536 Length:692 Species:Drosophila melanogaster
Sequence 2:NP_446376.1 Gene:Abcc5 / 116721 RGDID:70913 Length:1436 Species:Rattus norvegicus


Alignment Length:572 Identity:148/572 - (25%)
Similarity:257/572 - (44%) Gaps:83/572 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 AITMSVPLFLGKVIDVVFNKSGMDSAAMAKLGEYSVLLFGIFVLGGFANFARVHLFGNAALRIVR 199
            |::|:|.|.|..:..|||.|                                      ..||...
  Rat   918 ALSMAVMLILKAIRGVVFVK--------------------------------------GTLRASS 944

  Fly   200 SLRSRLYRSMLMQEVGWFDTKGTGELINRLSNDTLMVGTSLSQNVSDGLRSVAMIGVGTGMMIYT 264
            .|...|:|.:|...:.:|||..||.::||.|.|...|...|.......:::|.::....||:...
  Rat   945 RLHDELFRRILRSPMKFFDTTPTGRILNRFSKDMDEVDVRLPFQAEMFIQNVILVFFCVGMIAGV 1009

  Fly   265 SPQ-LAAVSALVVPAMAGMAIVYGRYVRRITKVELDKYAEIMKFAEERFGNVKTVKTFCREQQEV 328
            .|. |.||..|:: ..:.:.||....:|.:.:::....:..:.........:.|:..:.:.|:.:
  Rat  1010 FPWFLVAVGPLLI-LFSVLHIVSRVLIRELKRLDNITQSPFLSHITSSIQGLATIHAYNKRQEFL 1073

  Fly   329 AAFDGKLDEALQIGYKETRARAIFFGLTGFCG--------NFIIISVLYYGGTLVLQDSLTIGAL 385
            ..:...||:          .:|.||..|  |.        :.|.|:::...|.:::   |..|.:
  Rat  1074 HRYQELLDD----------NQAPFFLFT--CAMRWLAVRLDLISIALITTTGLMIV---LMHGQI 1123

  Fly   386 TAFMLYAGYV---AISMNGLSNF----YSQLNKGIGASERI---WEILDRECSIPIDKGVVPLEK 440
            .:  .|||..   |:.:.||..|    .|:......:.|||   .:.|..|....|.....|.:.
  Rat  1124 PS--AYAGLAISYAVQLTGLFQFTVRLASETEARFTSVERINHYIKTLSLEAPARIKNKAPPHDW 1186

  Fly   441 P-VGEVGFQNVFFTF-PTRPESAVLTDFSLNLMPGTTTAVVGRSGSGKTTIALLMLRLYDPQGGT 503
            | .||:.|:|....: ...|  .||...|..:.|.....:|||:||||:::.:.:.||.:..||.
  Rat  1187 PQEGEITFENAEMRYRENLP--LVLKKVSFTIKPKEKIGIVGRTGSGKSSLGMALFRLVELSGGC 1249

  Fly   504 VHLDGIDLRTVNPQWLRNNIGAVSQEPVLFSCSIRENILYGANPGETPSPERLQQVIEDANVSQF 568
            :.:||:.:..:....||:.:..:.|||||||.::|.|:    :|....:.|::...:|..::.:.
  Rat  1250 IKIDGVRISDIGLADLRSKLTIIPQEPVLFSGTVRSNL----DPFNQYTEEQIWDALERTHMKEC 1310

  Fly   569 TDQLPDGLDTLVGQRGMMLSGGQKQRVAIARALIKNPAILILDEATSALDAVSENLVQNALDNLI 633
            ..|||..|::.|.:.|...|.|::|.:.|||||:::..||||||||:|:|..::.|:|..:....
  Rat  1311 IAQLPLKLESEVMENGDNFSVGERQLLCIARALLRHCKILILDEATAAMDTETDLLIQETIREAF 1375

  Fly   634 QGRTVLTIAHRLSTIRNADQIAVLSDGKIVEQGSYNELMGIQEGVFRELVAS 685
            ...|:|||||||.|:..:|:|.||:.|::||..:.:.|:......|..:.|:
  Rat  1376 ADCTMLTIAHRLHTVLGSDRIMVLAQGQVVEFDTPSVLLSNDSSRFYAMCAA 1427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3156NP_569844.2 MdlB 106..687 CDD:224055 148/572 (26%)
ABC_membrane 127..395 CDD:279056 54/268 (20%)
ABC_MTABC3_MDL1_MDL2 447..686 CDD:213216 79/240 (33%)
Abcc5NP_446376.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 12..38
PLN03130 100..1424 CDD:215595 147/567 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 499..569
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 795..822
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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