DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3156 and tap2

DIOPT Version :9

Sequence 1:NP_569844.2 Gene:CG3156 / 30994 FlyBaseID:FBgn0023536 Length:692 Species:Drosophila melanogaster
Sequence 2:XP_002942649.3 Gene:tap2 / 100489020 XenbaseID:XB-GENE-481680 Length:728 Species:Xenopus tropicalis


Alignment Length:656 Identity:219/656 - (33%)
Similarity:342/656 - (52%) Gaps:53/656 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 CLH---HRTARSLQHSLPP------PNRYHSHLHPTLRMPWWCMRRGFAQSSKWLARNAKANLPT 91
            ||.   |:|.|.|.||..|      ||.:.|||.|.|....|.:          ::.|.   ||.
 Frog    86 CLSIPLHQTLRLLLHSHVPEMHSSFPNSFPSHLPPFLACLLWDL----------VSPNI---LPN 137

  Fly    92 AVGAGIVPAPVKMGRSQYGRLLSLTKSEKWVLTAGIGCLVVSSAI-TMSVPLFLGKVIDVV---F 152
            ....|...:. |..|..:.|||..:..: |:...|....:..:.| .|.:|.::|:|||::   :
 Frog   138 KSAEGEANSK-KRERENFIRLLKYSIPD-WLPLCGAFVFLTLALIGEMFIPYYMGRVIDILSTNY 200

  Fly   153 NKSGMDSAAMAKLGEYSVLLFGIFV--LGGFANFARVHLFGNAALRIVRSLRSRLYRSMLMQEVG 215
            |:... ..||:.:..:|: ...||.  .||        ||..:..|:.:.||..|:||::.||:.
 Frog   201 NEREF-LRAMSFMAMFSI-TSSIFAGSRGG--------LFMFSLARLTQRLRLLLFRSVIKQEIA 255

  Fly   216 WFDTKGTGELINRLSNDTLMVGTSLSQNVSDGLRS-VAMIGVGTGMMIYTSPQLAAVSALVVPAM 279
            :|:...:|::.:||:|||..|..|::.||:..||. |..:|| ...|...|.||..::.:..|..
 Frog   256 FFEATKSGDITSRLTNDTARVSRSIAANVNITLRMLVKCVGV-YSFMFSLSWQLTLLTFISSPLT 319

  Fly   280 AGMAIVYGRYVRRITKVELDKYAEIMKFAEERFGNVKTVKTFCREQQEVAAFDGKLDEALQIGYK 344
            ..:..||..|.:.:.|...|..|...:.|:|...:|:.|.:|..|::|...::..|.|...:..:
 Frog   320 WIIQKVYNYYHQDLVKRVQDSIARSSELAKEIIESVRNVYSFAAEEEEAKRYENSLQETHVLQTR 384

  Fly   345 ETRARAIFFGLTGFCGNFIIISVLYYGGTLVLQDSLTIGALTAFMLYAGYVAISMNGLSNFYSQL 409
            .....|::..:|........:::||||..|:....::.|.:.:|:||.......:..|.:..|::
 Frog   385 RDFVTALYLLVTRLVNLGTQVTMLYYGQILIRSGFISSGKMVSFILYQMESDSYIRTLVHMLSEI 449

  Fly   410 NKGIGASERIWEILDRECSIPIDKGVVP--LEKPVGEVGFQNVFFTFPTRPESAVLTDFSLNLMP 472
            ....||:|::::.||||..:.....:.|  |:   |...|.||.|::|:|||...|.:.|..|.|
 Frog   450 THAAGAAEKVFQYLDREPQVSASGCLCPGTLQ---GRFEFSNVTFSYPSRPEILALQNVSFTLPP 511

  Fly   473 GTTTAVVGRSGSGKTTIALLMLRLYDPQGGTVHLDGIDLRTVNPQWLRNNIGAVSQEPVLFSCSI 537
            |:.||:||.||.||||...|:.|.|:||||.:.|||..|:....::|.:.:..|:||||||:.|:
 Frog   512 GSVTALVGPSGGGKTTCVSLLERFYEPQGGNILLDGKPLKEYKHEYLHSKVALVAQEPVLFAGSV 576

  Fly   538 RENILYGA-NPGETPSPERLQQVIEDANVSQFTDQLPDGLDTLVGQRGMMLSGGQKQRVAIARAL 601
            ||||.||. |..|    |:|:.....|....|.:.:....||.||..|..||.|||||||:||||
 Frog   577 RENISYGLYNIPE----EKLKAAARKAKAEDFIEGMEKAYDTDVGNSGAQLSAGQKQRVALARAL 637

  Fly   602 IKNPAILILDEATSALDAVSENLVQNALDNLIQGRTVLTIAHRLSTIRNADQIAVLSDGKIVEQG 666
            .:.|.:||||||:|.|||.:|:.:|.:|.: |:..::|.|||||.|::.||||.||..|.:||||
 Frog   638 ARKPKLLILDEASSCLDAETEHEIQKSLQS-IEDLSLLIIAHRLRTVQKADQILVLEAGNLVEQG 701

  Fly   667 SYNELM 672
            ::.:|:
 Frog   702 THEKLV 707

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3156NP_569844.2 MdlB 106..687 CDD:224055 197/577 (34%)
ABC_membrane 127..395 CDD:279056 72/274 (26%)
ABC_MTABC3_MDL1_MDL2 447..686 CDD:213216 107/227 (47%)
tap2XP_002942649.3 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D684058at2759
OrthoFinder 1 1.000 - - FOG0000243
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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