DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3156 and abcc8b

DIOPT Version :9

Sequence 1:NP_569844.2 Gene:CG3156 / 30994 FlyBaseID:FBgn0023536 Length:692 Species:Drosophila melanogaster
Sequence 2:XP_021323602.1 Gene:abcc8b / 100329706 ZFINID:ZDB-GENE-120215-45 Length:1607 Species:Danio rerio


Alignment Length:513 Identity:134/513 - (26%)
Similarity:240/513 - (46%) Gaps:49/513 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   195 LRIVRSLRSRLYRSMLMQEVGWFDTKGTGELINRLSNDTLMVGTSLSQNVSDGLRSVAMIGVGTG 259
            ||:.:.|...|.|.:::..:..|:|...|.::||.|.||..:...:...:....||..:.....|
Zfish  1116 LRVAKELHCSLLRIIVLAPMRLFETTPLGNILNRFSTDTNTIDQHIPVTMECLSRSTLLCVSAVG 1180

  Fly   260 MMIYTSPQ-LAAVSALVVPAMAGMAIVYGRYVRRITKVELDKYAE-----IMKFAEERFGNVKTV 318
            ::.|.:|. |.|:..|.|      |..:.:...|:...:|.:..:     ::....:....:.|:
Zfish  1181 VISYVTPVFLIALLPLTV------ACYFIQKYFRVASRDLQQLEDSTEMPLLSHYSQTIEGLTTI 1239

  Fly   319 KTFCREQQEVAAFDGKLDEALQIGYKETRARAIFFGLTGFCGNFIIISVLYYGGTLV-------- 375
            :.|..||:    |..||.|       .|.|..|..........::.:.:.|.|..:|        
Zfish  1240 RAFRHEQR----FKKKLLE-------HTDANNISSLFLTAANRWLEVRMEYIGALVVLIAAVASI 1293

  Fly   376 ---LQDSLTIGALTAFMLYAGYVAISMNGLSNFYSQLNKGIGASERIWEILDRECSIPIDKGVVP 437
               |...|:.|.:...:.||..|:..:|.:....:.:...:|..:|:..::..:.. ..|..:.|
Zfish  1294 TNALYRQLSAGLVGLGLTYALMVSNYLNWIVRNLADMEVQLGCVKRVSGLIHTQPE-SYDNIMTP 1357

  Fly   438 LEKPV-----GEVGFQNVFFTFPT--RPESAVLTDFSLNLMPGTTTAVVGRSGSGKTTIALLMLR 495
            .:.|.     ||:..||:...:.:  :|   ||...|.::.||....:.||:||||::.:|.:.|
Zfish  1358 AQVPAGWPKYGEIQIQNLSVRYDSSLKP---VLKHVSAHIRPGQKVGICGRTGSGKSSFSLALFR 1419

  Fly   496 LYDPQGGTVHLDGIDLRTVNPQWLRNNIGAVSQEPVLFSCSIRENILYGANPGETPSPERLQQVI 560
            :.|...|.:.:||||:..:..|.||:....:.|:|:|||.:||.|:    :|....:.|.|.:.:
Zfish  1420 MVDTFEGQISIDGIDISKLPLQTLRSKFSIILQDPILFSGTIRFNL----DPERKATDEMLWEAL 1480

  Fly   561 EDANVSQFTDQLPDGLDTLVGQRGMMLSGGQKQRVAIARALIKNPAILILDEATSALDAVSENLV 625
            |.|.:......||.|||.:|.:.|...|.||:|...:|||.::..:|||:||||:::|..:|:::
Zfish  1481 EIAQLMPVVKALPGGLDAVVTEGGENFSQGQRQLFCLARAFVRKSSILIMDEATASIDMATESIL 1545

  Fly   626 QNALDNLIQGRTVLTIAHRLSTIRNADQIAVLSDGKIVEQGSYNELMGIQEGVFRELV 683
            |..:......|||:|||||:.||..:|.:.|:..|.|:|....:.|:..::.||...|
Zfish  1546 QKVVMTAFADRTVVTIAHRVHTILGSDVVIVMKHGGIIEYDEPDVLLEQKDSVFSAFV 1603

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3156NP_569844.2 MdlB 106..687 CDD:224055 134/513 (26%)
ABC_membrane 127..395 CDD:279056 44/216 (20%)
ABC_MTABC3_MDL1_MDL2 447..686 CDD:213216 81/239 (34%)
abcc8bXP_021323602.1 SunT 239..1600 CDD:331423 132/508 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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