DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3156 and abcb8

DIOPT Version :9

Sequence 1:NP_569844.2 Gene:CG3156 / 30994 FlyBaseID:FBgn0023536 Length:692 Species:Drosophila melanogaster
Sequence 2:NP_001121515.1 Gene:abcb8 / 100158634 XenbaseID:XB-GENE-1010256 Length:688 Species:Xenopus tropicalis


Alignment Length:677 Identity:239/677 - (35%)
Similarity:374/677 - (55%) Gaps:63/677 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 SLQHSLPPPNRYHSHLHPTLRMPWWCMRRGFAQSSKWLA------------RNAKANL-----PT 91
            ||..:|...:|..:...|..|.||..:::|     |.||            |.|:..:     |.
 Frog    33 SLPATLANYSRLRNACRPPWRSPWKPVKKG-----KLLAVLLGPAVLGVGVRAARCQVELIAPPL 92

  Fly    92 AVGAGIVPAPVKMGRSQYGRLLSLTKSEKWVLTAGIGCLVVSSAITMSVPLFLGKVIDVVFNKSG 156
            .|..|..|.| :...:::.:||   :.:...|...:.....::.:.:.:||.||::::|| ::..
 Frog    93 IVPQGARPEP-EFNWAEFWKLL---RPQLIALLTAVLLAFGAALLNIRIPLMLGELVNVV-SRYT 152

  Fly   157 MDSAAMAKLGEY-------SVLLFGIFVLGGFANFARVHLFGNAALRIVRSLRSRLYRSMLMQEV 214
            .:.|     |.|       ::.|..::...|......:.|......|:..|:|..|:.|:|.|:|
 Frog   153 REHA-----GNYLQEVQGPALKLLCLYGAQGLLTCGYIVLLSRVGERVAGSMRKSLFFSLLRQDV 212

  Fly   215 GWFDTKGTGELINRLSNDTLMVGTSLSQNVSDGLRSVAMIGVGTGM-MIYTSPQLAAVSALVVPA 278
            .:||.:.||.|:|||::|.....:|..|.:|.||||:... ||..: :.|.||:|..:..:|:|.
 Frog   213 AFFDAEKTGLLVNRLTSDVQEFKSSFKQVISQGLRSLTQT-VGCFLSLYYISPKLTGLLLVVMPV 276

  Fly   279 MAGMAIVYGRYVRRITKVELDKYAEIMKFAEERFGNVKTVKTFCREQQEVAAFDGKLD------E 337
            :.|...:.|.::|::::...::.|.....|:|..|||:|||.|..|.:|:..:..::|      |
 Frog   277 LVGSGALIGSFLRKLSRRAQEQVARATGLADEALGNVRTVKAFAMESREMELYSAEVDKSSGQNE 341

  Fly   338 ALQIGYKETRARAIFFGLTGFCGNFIIISVLYYGGTLVLQDSLTIGALTAFMLYAGYVAISMNGL 402
            .|.:|.      |:|.||:....|.|::..::.||:|:....|:.|.|.:|::.:..|..||..:
 Frog   342 VLGVGI------AVFQGLSNVVLNCIVLGTIFAGGSLMSSKELSAGELMSFLVASQTVQRSMANM 400

  Fly   403 SNFYSQLNKGIGASERIWEILDRECSIPIDKGVVPLEKPV--GEVGFQNVFFTFPTRPESAVLTD 465
            |..:.|:.:|:.|..|::|.:..|.:||:..|   .:.||  ||:.|::|.|::||||...||..
 Frog   401 SVLFGQVVRGLSAGGRVFEFMSLEPTIPLSGG---FKLPVLRGEIHFKDVSFSYPTRPGHEVLRS 462

  Fly   466 FSLNLMPGTTTAVVGRSGSGKTTIALLMLRLYDPQGGTVHLDGIDLRTVNPQWLRNN-IGAVSQE 529
            |.|.:..|.|.|:||:||.||:|:|.|:.|.|||..|.|.|||:|:|.::|.|||.. ||.::||
 Frog   463 FDLRIPHGKTVALVGQSGGGKSTVAALLERFYDPTEGAVQLDGVDIRILDPSWLRGEVIGFINQE 527

  Fly   530 PVLFSCSIRENILYGANPGETPSPERLQQVIEDANVSQFTDQLPDGLDTLVGQRGMMLSGGQKQR 594
            ||||..:|.|||.:| .|..|.:  .:.:....||...|....|:|.:|::|:||:.||||||||
 Frog   528 PVLFGTTIIENIRFG-RPDATDA--EVHEAAIQANADSFIRSFPEGYNTMLGERGVTLSGGQKQR 589

  Fly   595 VAIARALIKNPAILILDEATSALDAVSENLVQNALDNLIQGRTVLTIAHRLSTIRNADQIAVLSD 659
            |||||||:|:|.||||||||||||..||..||.|||....|||||.||||||||..||.|.|||.
 Frog   590 VAIARALLKDPKILILDEATSALDTESERAVQVALDRARSGRTVLVIAHRLSTISEADFIVVLSK 654

  Fly   660 GKIVEQGSYNELMGIQEGVFRELVASQ 686
            |::.|.|::.:|:. :.|::.:|:..|
 Frog   655 GQVAEFGTHQDLLR-RGGLYADLIRRQ 680

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3156NP_569844.2 MdlB 106..687 CDD:224055 220/598 (37%)
ABC_membrane 127..395 CDD:279056 76/281 (27%)
ABC_MTABC3_MDL1_MDL2 447..686 CDD:213216 123/239 (51%)
abcb8NP_001121515.1 ABC_6TM_ABCB8_like 123..417 CDD:350018 83/306 (27%)
MsbA_rel 187..680 CDD:131259 205/506 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54509
OrthoDB 1 1.010 - - D221577at33208
OrthoFinder 1 1.000 - - FOG0000243
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.930

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