DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4g1 and Cyp26c1

DIOPT Version :9

Sequence 1:NP_525031.1 Gene:Cyp4g1 / 30986 FlyBaseID:FBgn0010019 Length:556 Species:Drosophila melanogaster
Sequence 2:XP_217935.3 Gene:Cyp26c1 / 308190 RGDID:1308843 Length:518 Species:Rattus norvegicus


Alignment Length:562 Identity:116/562 - (20%)
Similarity:200/562 - (35%) Gaps:146/562 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 VLGFSPMLTTLVGTLVAMALYEYWRRNSREYRMVANIPSPP---ELPILGQAHVAAGLSNAEILA 82
            :||.:..|.||..||            ||::  .:.:|.|.   ..|..|:        ....|.
  Rat    25 LLGLAQQLWTLRWTL------------SRDW--ASTLPLPKGSMGWPFFGE--------TLHWLV 67

  Fly    83 VGLGY----LNKYGETMKAWLGNVLLVFLTNPSDIELILSGHQHLTKAEEYRYFKPWFGDGLLI- 142
            .|..:    ..:||...|..|....::.::...::..||.|...|.:::..:......|...|: 
  Rat    68 QGSRFHSSRRERYGTVFKTHLLGRPVIRVSGAENVRTILLGEHRLVRSQWPQSAHILLGSHTLLG 132

  Fly   143 SNGHHWRHHRKMIAPTFHQSILKSFVPTFVDHSKAVVARMGLEAGKSFDVHDYMSQTT----VDI 203
            :.|...|..||::|..|.:..|:.|||...:..:..| |....|.:...|:......|    ..|
  Rat   133 AVGERHRQRRKVLARVFSRPALEQFVPRLQEALRREV-RSWCAAQRPVAVYQAAKALTFRMAARI 196

  Fly   204 LLSTAMGVKKLPEGNKSFEYAQAVVDMCDIIHKRQVKLLYRLDSIYKFTKLREKGDRMMNIILGM 268
            ||...:...:..|..::||              |.|:.|:.|.....|:.||             
  Rat   197 LLGLQLDEARCTELAQTFE--------------RLVENLFSLPLDVPFSGLR------------- 234

  Fly   269 TSKVVKDRKENFQEESRAIVEEISTPVASTPASKKEGLRDDLDDIDENDVGAKRRLALLDAMVEM 333
              |.::.|.:.:|.....|.|::...:.:.|..                        .|..::..
  Rat   235 --KGIRARDQLYQHLDEVIAEKLREELTAEPGD------------------------ALHLIINS 273

  Fly   334 AKNPDIEWNEKDIMDEVNTIMFEGHDTTSAGSSFALCMMGIHKDIQAKVFAEQKAIFGDNMLRDC 398
            |:....|.:.:::.:....::|....||::.|:..:.::..|....||:   |:.:....:...|
  Rat   274 ARELGRELSVQELKELAVELLFAAFFTTASASTSLILLLLQHPAAIAKI---QQELSAQGLGSPC 335

  Fly   399 TFADTM-------------------EMKYLERVILETLRLYPPVP----LIARRLDYDLKLASGP 440
            :.|...                   .::|::.|:.|.|||.|||.    ...|..:.|      .
  Rat   336 SCAPRASGSRPDCSCEPDLSLAVLGRLRYVDCVVKEVLRLLPPVSGGYRTALRTFELD------G 394

  Fly   441 YTVPKGTTVIVLQYCVHRRPDIYPNPTK-FDPDNFLPERMANR------HYYSFIPFSAGPRSCV 498
            |.:|||.:|:......|....:|.:|.: |||:.|..|....|      ||   |||..|.|||:
  Rat   395 YQIPKGWSVMYSIRDTHETAAVYRSPPEGFDPERFGVESEDARGSGGRFHY---IPFGGGARSCL 456

  Fly   499 GRKYAMLKLKVLLSTIVRNY----------------IVHSTD 524
            |::.|...|::|...:||..                |||..|
  Rat   457 GQELAQAVLQLLAVELVRTARWELATPAFPVMQTVPIVHPVD 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4g1NP_525031.1 p450 58..518 CDD:278495 103/501 (21%)
Cyp26c1XP_217935.3 p450 40..500 CDD:299894 109/535 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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