DRSC/TRiP Functional Genomics Resources

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Protein Alignment ase and Msc

DIOPT Version :9

Sequence 1:NP_476694.1 Gene:ase / 30985 FlyBaseID:FBgn0000137 Length:486 Species:Drosophila melanogaster
Sequence 2:XP_008761698.1 Gene:Msc / 312897 RGDID:1305496 Length:220 Species:Rattus norvegicus


Alignment Length:187 Identity:49/187 - (26%)
Similarity:76/187 - (40%) Gaps:55/187 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 MLGAVQSAAASTTNTTPISSQRKRPLGESQKQNRHNQQNQQLSKTSVPAKKCKTNKKLAVERPPK 131
            :|...:|.|:.:.|:   |::.:.|.||.:            ..|...|..||.      :||..
  Rat    31 LLRPERSYASPSDNS---SAEEEDPDGEEE------------PGTVGAAGGCKR------KRPRG 74

  Fly   132 AGTISHPHKSQSDQSFGTPGRKGLPLPQAVARR---------NARERNRVKQVNNGFALLREKIP 187
            |..      |.:....|:.|:|.|| |:..|..         |||||.|::.::..|:.|:..:|
  Rat    75 ADA------SGAGGGAGSTGKKALP-PKGSAAECKQSQRNAANARERARMRVLSKAFSRLKTSLP 132

  Fly   188 EEVSEAFEAQGAGRGASKKLSKVETLRMAVEYIRSLEKLLGFD------FPPLNSQG 238
            ....:.            ||||::|||:|..||..|.:||..|      ..|:|..|
  Rat   133 WVPPDT------------KLSKLDTLRLASSYIAHLRQLLQEDRYEDSYVHPVNLVG 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aseNP_476694.1 HLH <172..224 CDD:278439 13/51 (25%)
MscXP_008761698.1 bHLH_TS_musculin 102..167 CDD:381546 23/76 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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