DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ase and Mesp1

DIOPT Version :9

Sequence 1:NP_476694.1 Gene:ase / 30985 FlyBaseID:FBgn0000137 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_001101001.1 Gene:Mesp1 / 308766 RGDID:1311751 Length:242 Species:Rattus norvegicus


Alignment Length:245 Identity:54/245 - (22%)
Similarity:80/245 - (32%) Gaps:108/245 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 SKTSVPAKKCKTNKKLAVERPPKAGTISHPHKSQSDQSFGTPGRKG-----LPLPQAVARRNARE 168
            ::.|.||..|        .||.:..              |||||:|     |...|   |::|.|
  Rat    44 AQASSPALPC--------ARPARRA--------------GTPGRRGTHGSRLGSGQ---RQSASE 83

  Fly   169 RNRVKQVNNGFAL--LREKIPEEVSEAFEAQGAGRGASKKLSKVETLRMAVEYIRSLEKLLGFD- 230
            |.:::......||  ||..:|..|:.          ..:.|:|:||||:|:.||..|..:||.. 
  Rat    84 REKLRMRTLARALHELRRFLPPSVAP----------IGQNLTKIETLRLAIRYIGHLSAVLGLSE 138

  Fly   231 --------------------------------FPPLNSQGNSSGSG-------------DDSFMF 250
                                            ..|:...|.|.||.             |.||::
  Rat   139 DSLRQQRHAVSPRGCPLCPDSGLAQAQSLGPHLSPVACSGVSWGSSPAYPRPRVAAESWDPSFLY 203

  Fly   251 IKDEFDCLDEHFDDSLSNYEMDEQQTVQQTLSEDMLNPPQASDLLPSLTT 300
            .:..          ||...||:...:          :|..:||:|..|.|
  Rat   204 TETA----------SLERQEMEPSPS----------SPLFSSDMLALLET 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aseNP_476694.1 HLH <172..224 CDD:278439 15/53 (28%)
Mesp1NP_001101001.1 HLH 77..130 CDD:278439 20/65 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.