DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ase and Tcf21

DIOPT Version :9

Sequence 1:NP_476694.1 Gene:ase / 30985 FlyBaseID:FBgn0000137 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_001027569.1 Gene:Tcf21 / 252856 RGDID:620523 Length:179 Species:Rattus norvegicus


Alignment Length:146 Identity:39/146 - (26%)
Similarity:62/146 - (42%) Gaps:41/146 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 QQLSKTSVPAKKCKTNKKLAVERPPKAGTISHPHKSQSDQSFGTP--GRKGL-----------PL 157
            |::......:.|..:||:.        ||.:...:..|:...|:|  ||.||           ||
  Rat    13 QEVEMLDCDSLKVDSNKEF--------GTSNESTEEGSNCENGSPQKGRGGLGKRRKAPTKKSPL 69

  Fly   158 P------QAVARR--NARERNRVKQVNNGFALLREKIPEEVSEAFEAQGAGRGASKKLSKVETLR 214
            .      :.|.|.  |||||.|::.::..|:.|:..:|....:.            ||||::|||
  Rat    70 SGVSQEGKQVQRNAANARERARMRVLSKAFSRLKTTLPWVPPDT------------KLSKLDTLR 122

  Fly   215 MAVEYIRSLEKLLGFD 230
            :|..||..|.::|..|
  Rat   123 LASSYIAHLRQILAND 138

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aseNP_476694.1 HLH <172..224 CDD:278439 13/51 (25%)
Tcf21NP_001027569.1 bHLH_TS_TCF21_capsulin 77..140 CDD:381547 24/74 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.