DRSC/TRiP Functional Genomics Resources

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Protein Alignment ase and cnd-1

DIOPT Version :10

Sequence 1:NP_476694.1 Gene:ase / 30985 FlyBaseID:FBgn0000137 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_001379767.1 Gene:cnd-1 / 183212 WormBaseID:WBGene00000561 Length:192 Species:Caenorhabditis elegans


Alignment Length:267 Identity:65/267 - (24%)
Similarity:84/267 - (31%) Gaps:118/267 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 PQAVARR-------NARERNRVKQVNNGFALLREKIPEEVSEAFEAQGAGRGASKKLSKVETLRM 215
            |..:::|       |.|||.|:..:||...:|||.||.....            :||||:||||:
 Worm    11 PAEISKRKVRRVKANGRERARMHGLNNALDMLREYIPITTQH------------QKLSKIETLRL 63

  Fly   216 AVEYIRSLEKLLGFDFPPLNSQGNSSGSGDDSFMFIKDEFDCLDEHFDDSLSNYEMDEQQT---V 277
            |..||.:|:::|                                          :.:||.|   .
 Worm    64 ARNYIDALQRML------------------------------------------QTNEQPTPLEY 86

  Fly   278 QQTLSEDMLNPPQASDLLPSLTTLNGLQYIRIPGTNTYQLLTT---DLLGDLSHEQ--KLEETAA 337
            ..||:..:           |.||.|.|  ..:......|||..   |:..|.||.|  .......
 Worm    87 AHTLANGL-----------SQTTTNML--ANLLQVQPRQLLPPSQFDIFSDPSHHQLHPSHPPPH 138

  Fly   338 SGQLSRSPVPQKVVRSPCSSP---VSPVASTELLLQTQTCATPLQQQVIKQEYVSTNISSSSNAQ 399
            |...|.||      .|.||.|   .||         ||..|.|||                  ..
 Worm   139 SSFSSSSP------SSSCSPPQYYYSP---------TQPSAAPLQ------------------GS 170

  Fly   400 TSPQQQQ 406
            ..||.||
 Worm   171 CDPQYQQ 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aseNP_476694.1 bHLH_TS_dAS-C_like 170..227 CDD:381587 20/56 (36%)
cnd-1NP_001379767.1 bHLH_TS_NeuroD 21..75 CDD:381433 24/65 (37%)
Neuro_bHLH 78..>126 CDD:463621 15/60 (25%)

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