DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ase and Ptf1a

DIOPT Version :9

Sequence 1:NP_476694.1 Gene:ase / 30985 FlyBaseID:FBgn0000137 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_446416.1 Gene:Ptf1a / 117034 RGDID:621709 Length:326 Species:Rattus norvegicus


Alignment Length:103 Identity:36/103 - (34%)
Similarity:46/103 - (44%) Gaps:19/103 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   152 RKGLPLPQAVARRNARERNRVKQVNNGFALLREKIPEEVSEAFEAQGAGRGASKKLSKVETLRMA 216
            |....|.|.....|.|||.|::.:|:.|..||..||....|            |:||||:|||:|
  Rat   155 RSEAELQQLRQAANVRERRRMQSINDAFEGLRSHIPTLPYE------------KRLSKVDTLRLA 207

  Fly   217 VEYIRSLEKLLGFDFPPLNS-------QGNSSGSGDDS 247
            :.||..|.:|:..|.|...|       .|.|...|.||
  Rat   208 IGYINFLSELVQADLPLRGSGTGGCGGPGGSRHLGGDS 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aseNP_476694.1 HLH <172..224 CDD:278439 18/51 (35%)
Ptf1aNP_446416.1 bHLH_TS_PTF1A 164..218 CDD:381423 24/65 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 229..249 5/17 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 304..326
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.