DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgcl and BAR1

DIOPT Version :9

Sequence 1:NP_525030.1 Gene:Pgcl / 30984 FlyBaseID:FBgn0011822 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_012249.1 Gene:BAR1 / 854797 SGDID:S000001277 Length:587 Species:Saccharomyces cerevisiae


Alignment Length:380 Identity:106/380 - (27%)
Similarity:161/380 - (42%) Gaps:81/380 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 MEHLSNYDNFQYYG-NISIGTPGQDFLVQFDTGSSNLWVPGSS---CI----------------- 109
            :|.|..::...||. .:.||||.|...|.|||||::.||..||   |:                 
Yeast    33 LEFLLQHEEEMYYATTLDIGTPSQSLTVLFDTGSADFWVMDSSNPFCLPNSNTSSYSNATYNGEE 97

  Fly   110 ---STACQDHQVFYKNKSST--YVANGTAFSITYGTGS-VSGYLSVDCVGFAGLTIQSQTFGEVT 168
               |..|:....:.:::|||  |:.|| .|.|||..|: ..|....:.|...|:.|.:..||.  
Yeast    98 VKPSIDCRSMSTYNEHRSSTYQYLENG-RFYITYADGTFADGSWGTETVSINGIDIPNIQFGV-- 159

  Fly   169 TEQGTNFVDAYFDGILGMGFPSL-AVDGVT-------PTF-QNMMQQGLVQSPVFSFFLRDNGSV 224
                ..:......|:||:|||.. :|.|..       |.| |.:..:.::....:|.||....|.
Yeast   160 ----AKYATTPVSGVLGIGFPRRESVKGYEGAPNEYYPNFPQILKSEKIIDVVAYSLFLNSPDSG 220

  Fly   225 TFYGGELILGGSDPSLYSGSL-------TYVNVVQA------------AYWKFQTDYIKVGSTSI 270
            |   |.::.|..|.|.:||.|       .|..:|.|            |..|...::    .|..
Yeast   221 T---GSIVFGAIDESKFSGDLFTFPMVNEYPTIVDAPATLAMTIQGLGAQNKSSCEH----ETFT 278

  Fly   271 STFAQAIADTGTSLIIAPQAQYDQISQLFNAN---SEGLF--ECSSTSYPDLIININGVDFKI-- 328
            :|....:.|:||||:.||:...|:::...||:   .||::  :| ..|..|:..|.:..|.:|  
Yeast   279 TTKYPVLLDSGTSLLNAPKVIADKMASFVNASYSEEEGIYILDC-PVSVGDVEYNFDFGDLQISV 342

  Fly   329 PAKYYIIEEE---DFCSLAIQSINQDFWIMGDVFLGRIYTEFDVGNQRLGFAPVN 380
            |....|:..|   .:|..|:|..| |..::|||||...|..||:.|.::..|..|
Yeast   343 PLSSLILSPETEGSYCGFAVQPTN-DSMVLGDVFLSSAYVVFDLDNYKISLAQAN 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PgclNP_525030.1 pepsin_retropepsin_like 67..378 CDD:299705 104/375 (28%)
Asp 76..379 CDD:278455 103/367 (28%)
BAR1NP_012249.1 SAP_like 43..395 CDD:133141 103/367 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157341773
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1339
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.700

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