DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgcl and YPS3

DIOPT Version :9

Sequence 1:NP_525030.1 Gene:Pgcl / 30984 FlyBaseID:FBgn0011822 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_013222.1 Gene:YPS3 / 850812 SGDID:S000004111 Length:508 Species:Saccharomyces cerevisiae


Alignment Length:409 Identity:108/409 - (26%)
Similarity:174/409 - (42%) Gaps:71/409 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 IPIQKSPNFKRSHKNIVAERDFVQQKYNRQYT---------ANGYPMEHLSNYDNFQYYGNISIG 84
            :.:..||.|.|    ::.:..:|:..:.::..         :||:....|:|..:| |...::||
Yeast    11 LAVLTSPAFGR----VLPDGKYVKIPFTKKKNGDNGELSKRSNGHEKFVLANEQSF-YSVELAIG 70

  Fly    85 TPGQDFLVQFDTGSSNLWVPGSS---CISTA-CQDHQVFYKNKSSTYVAN-GTAFSITYGTGS-V 143
            ||.|:..|..||||::|||||..   |.|.. |..:.||.|.||||:.|| .:.|...||.|: .
Yeast    71 TPSQNLTVLLDTGSADLWVPGKGNPYCGSVMDCDQYGVFDKTKSSTFKANKSSPFYAAYGDGTYA 135

  Fly   144 SGYLSVDCVGFAGLTIQSQTFGEVTTEQGTNFVDAYFDGILGMGFPSLAV---------DGVTPT 199
            .|....|.:.:..|.:...:|. |..|..:.|      |:||:|..:|.|         |..:..
Yeast   136 EGAFGQDKLKYNELDLSGLSFA-VANESNSTF------GVLGIGLSTLEVTYSGKVAIMDKRSYE 193

  Fly   200 FQN----MMQQGLVQSPVFSFFLRDNGSVTFYGGELILGGSDPSLYSGSL---TYVNVVQAAYWK 257
            :.|    :...|.:.:..:|.||.|....:   |.::.|..|.|.|.|.|   ..||:.::..::
Yeast   194 YDNFPLFLKHSGAIDATAYSLFLNDESQSS---GSILFGAVDHSKYEGQLYTIPLVNLYKSQGYQ 255

  Fly   258 -------------FQTDYIKVGSTSISTFAQAIADTGTSLIIAPQAQYDQISQLFNAN---SEGL 306
                         .|||  |...|..:|...|:.|:||:|...|......:::..||:   :.|.
Yeast   256 HPVAFDVTLQGLGLQTD--KRNITLTTTKLPALLDSGTTLTYLPSQAVALLAKSLNASYSKTLGY 318

  Fly   307 FE--C-SSTSYPDLIININGVDFKIPAKYYIIEEE-DFCSLAI--QSINQDFWIMGDVFLGRIYT 365
            :|  | ||.:...:..:..|.....|...:.::.. ..|.|||  |:.|... |:||.||...|.
Yeast   319 YEYTCPSSDNKTSVAFDFGGFRINAPLSDFTMQTSVGTCVLAIIPQAGNATA-ILGDSFLRNAYV 382

  Fly   366 EFDVGNQRLGFAPVNSAVG 384
            .:|:.|..:..|......|
Yeast   383 VYDLDNYEISLAQAKYGTG 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PgclNP_525030.1 pepsin_retropepsin_like 67..378 CDD:299705 99/354 (28%)
Asp 76..379 CDD:278455 97/346 (28%)
YPS3NP_013222.1 SAP_like 61..396 CDD:133141 98/348 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157341771
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1339
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.700

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