DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgcl and YPS1

DIOPT Version :9

Sequence 1:NP_525030.1 Gene:Pgcl / 30984 FlyBaseID:FBgn0011822 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_013221.1 Gene:YPS1 / 850811 SGDID:S000004110 Length:569 Species:Saccharomyces cerevisiae


Alignment Length:459 Identity:105/459 - (22%)
Similarity:176/459 - (38%) Gaps:118/459 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 EANSTLRRIPIQKSPNFKRSHKNIVAERDFVQQKYNRQYTANGYPMEHLSNYDNFQYYGNISIGT 85
            ::||...::|..|.  :..|.:|:.:::....:...|   |:||....::|..:| |..::.:||
Yeast    33 DSNSKFVKLPFHKL--YGDSLENVGSDKKPEVRLLKR---ADGYEEIIITNQQSF-YSVDLEVGT 91

  Fly    86 PGQDFLVQFDTGSSNLWVPGSS---CISTA----------------------------------- 112
            |.|:..|..|||||:||:.||.   |.|.:                                   
Yeast    92 PPQNVTVLVDTGSSDLWIMGSDNPYCSSNSMGSSRRRVIDKRDDSSSGGSLINDINPFGWLTGTG 156

  Fly   113 -----------------------------CQDHQVFYKNKSSTYVANGTAFSITYGTGS-VSGYL 147
                                         ||.:..|..:.|||:.:|.|.|||:||.|: .||..
Yeast   157 SAIGPTATGLGGGSGTATQSVPASEATMDCQQYGTFSTSGSSTFRSNNTYFSISYGDGTFASGTF 221

  Fly   148 SVDCVGFAGLTIQSQTFGEVTTEQGTNFVDAYFDGILGMGFPSLAV---------DGVTPTFQN- 202
            ..|.:..:.|.:...:|. |..|..:..      |:||:|.|.|.|         .|....:.| 
Yeast   222 GTDVLDLSDLNVTGLSFA-VANETNSTM------GVLGIGLPELEVTYSGSTASHSGKAYKYDNF 279

  Fly   203 ---MMQQGLVQSPVFSFFLRDNGSVTFYGGELILGGSDPSLYSGSL---TYVNVVQAAYW----K 257
               :...|.::|..:|.:|.|:.::   .|.::.|..|.|.|:|:|   ..||.:.|:.:    :
Yeast   280 PIVLKNSGAIKSNTYSLYLNDSDAM---HGTILFGAVDHSKYTGTLYTIPIVNTLSASGFSSPIQ 341

  Fly   258 FQTDYIKVG--------STSISTFAQAIADTGTSLIIAPQAQYDQISQLFNANSEG-----LFEC 309
            |......:|        .|..:|...|:.|:||:|...||.....|:....|....     :.:|
Yeast   342 FDVTINGIGISDSGSSNKTLTTTKIPALLDSGTTLTYLPQTVVSMIATELGAQYSSRIGYYVLDC 406

  Fly   310 SSTSYPDLIININGVDFKIPAKYYIIEEEDFCSLAIQSINQDF-WIMGDVFLGRIYTEFDVGNQR 373
            .|....:::.:..|.....|...:|:.....|.|.|...:.|. .|:||.||...|..:|:.|..
Yeast   407 PSDDSMEIVFDFGGFHINAPLSSFILSTGTTCLLGIIPTSDDTGTILGDSFLTNAYVVYDLENLE 471

  Fly   374 LGFA 377
            :..|
Yeast   472 ISMA 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PgclNP_525030.1 pepsin_retropepsin_like 67..378 CDD:299705 95/413 (23%)
Asp 76..379 CDD:278455 93/404 (23%)
YPS1NP_013221.1 SAP_like 81..477 CDD:133141 94/406 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157341770
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1339
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.700

Return to query results.
Submit another query.