DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgcl and AT1G69100

DIOPT Version :9

Sequence 1:NP_525030.1 Gene:Pgcl / 30984 FlyBaseID:FBgn0011822 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_001320489.1 Gene:AT1G69100 / 843242 AraportID:AT1G69100 Length:375 Species:Arabidopsis thaliana


Alignment Length:388 Identity:114/388 - (29%)
Similarity:177/388 - (45%) Gaps:47/388 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LVFLAGLIVLVGEANSTLRRIPIQKSPNFKRSHKNIVAERDFVQQKYNRQYTANGYPMEHLSNYD 73
            |:||  :|.|...:|.|:       |.:.||...|:                 .|.....|.|:|
plant    13 LLFL--VIQLCHGSNDTV-------SISLKRHTLNV-----------------GGTSFGGLKNFD 51

  Fly    74 NFQYYGNISIGTPGQDFLVQFDTGSSNLWVPGSSCISTACQDHQVFYKNKSST-YVANGTAFSIT 137
            ...:||.||:|:|.|.|.|.|||||::||||...........|..|.|:.|.| .:..|...:|.
plant    52 GVVFYGEISVGSPPQKFNVVFDTGSTDLWVPSKEWPEETDHKHPKFDKDASKTCRLMKGGEVNIA 116

  Fly   138 YGTGSVSGYLSVDCVGFAGLTIQSQTFGEVTTEQGTNFVDAYFDGILGMGFPSLAVDGVTPTFQN 202
            |.||||.|.|:.|.|...|:.|:||.. .:.....|.|....|||::|:|..|....|....::|
plant   117 YETGSVVGILAQDNVNVGGVVIKSQDL-FLARNPDTYFRSVKFDGVIGLGIKSSRAQGSVTVWEN 180

  Fly   203 MMQQGLVQSPVFSFFLR---DNGSVTFYGGELILGGSDPSLYSGSLTYVNV-VQAAYWKFQTDYI 263
            |::|.|:..|:||.:||   .:|.....||:::.||.||..:.|...||.: :....||.:...|
plant   181 MVKQKLITKPIFSLYLRPHKGDGGEDPNGGQIMFGGFDPKQFKGEHVYVPMKLSDDRWKIKMSKI 245

  Fly   264 KVGSTSISTFAQ-----AIADTGTSLIIAPQAQYDQISQLFNANSEGLFECSS-TSYPDLIININ 322
            .:.......|..     |:.|:|::.|..|.....:|.:...| ::.:..|.. .:.||:...|.
plant   246 YINGKPAINFCDDVECTAMVDSGSTDIFGPDEAVGKIYKEIGA-TKVIIRCEQFPALPDIYFEIG 309

  Fly   323 GVDFKIPAKYYI---IEEEDFCSLAI-QSIN-QDFWIMGDVFLGRIYTEFDVGN---QRLGFA 377
            |...::....|:   ...:..|.|.| :|.| :..|::|:.|:.:.:|.||.|:   .|:|||
plant   310 GKHLRLTKHDYVEVKTNPKKRCRLRIVKSKNRRKDWVLGEAFMTKFHTVFDYGDVKTPRIGFA 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PgclNP_525030.1 pepsin_retropepsin_like 67..378 CDD:299705 102/330 (31%)
Asp 76..379 CDD:278455 99/321 (31%)
AT1G69100NP_001320489.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1339
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54317
OrthoDB 1 1.010 - - D1619495at2759
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_108601
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
76.690

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