DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgcl and AT4G04460

DIOPT Version :9

Sequence 1:NP_525030.1 Gene:Pgcl / 30984 FlyBaseID:FBgn0011822 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_192355.1 Gene:AT4G04460 / 825776 AraportID:AT4G04460 Length:508 Species:Arabidopsis thaliana


Alignment Length:508 Identity:154/508 - (30%)
Similarity:220/508 - (43%) Gaps:139/508 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RFQIKSLVFLAGLIVLVGEA------NSTLRRIPIQKSPNFKRSHKNIVAERDFVQQK------- 54
            |||...||||...::|:..|      :.|: ||.::|.   |....|.:|.:.|::.:       
plant     4 RFQSFLLVFLLSCLILISTASCERNGDGTI-RIGLKKR---KLDRSNRLASQLFLKNRGSHWSPK 64

  Fly    55 -YNRQYTANGYPMEHLSNYDNFQYYGNISIGTPGQDFLVQFDTGSSNLWVPGSSC-ISTACQDHQ 117
             |.|....|. .|..|.||.:.||||:|:||||.|.|.|.|||||||||:|.:.| :|.||..|.
plant    65 HYFRLNDENA-DMVPLKNYLDAQYYGDITIGTPPQKFTVIFDTGSSNLWIPSTKCYLSVACYFHS 128

  Fly   118 VFYKNKSSTYVANGTAFSITYGTGSVSGYLSVDCVGFAGLTIQSQTFGEVTTEQGTNFVDAYFDG 182
            .:..::||:|..||...||.||||::|||.|.|.|....:.::.|.|.|.|:|.|..|:.|.|||
plant   129 KYKASQSSSYRKNGKPASIRYGTGAISGYFSNDDVKVGDIVVKEQEFIEATSEPGITFLLAKFDG 193

  Fly   183 ILGMGFPSLAVDGVTPTFQNMMQQGLVQSPVFSFFLRDNGSVTFYGGELILGGSDPSLYSGSLTY 247
            |||:||..::|...||.:.||:::|||:.|:|||:|..|.... .|||::.||.||..:.|..|:
plant   194 ILGLGFKEISVGNSTPVWYNMVEKGLVKEPIFSFWLNRNPKDP-EGGEIVFGGVDPKHFKGEHTF 257

  Fly   248 VNVVQAAYWKFQTDYIKVGSTSISTFAQ---AIADTGTSLIIAPQA------------------- 290
            |.|....||:|....:::........|:   ||||:||||:..|..                   
plant   258 VPVTHKGYWQFDMGDLQIAGKPTGYCAKGCSAIADSGTSLLTGPSTVITMINHAIGAQGIVSREC 322

  Fly   291 -----QY-----------------------------------------DQISQLFN--------- 300
                 ||                                         |..|.|.|         
plant   323 KAVVDQYGKTMLNSLLAQEDPKKVCSQIGVCAYDGTQSVSMGIQSVVDDGTSGLLNQAMCSACEM 387

  Fly   301 -------------------------------ANSEGLFECSS-TSYPDLIININGVDFKIPAKYY 333
                                           .|.:...:|.. :|.|.:..:|.|..|.:..:.|
plant   388 AAVWMESELTQNQTQERILAYAAELCDHIPTQNQQSAVDCGRVSSMPIVTFSIGGRSFDLTPQDY 452

  Fly   334 I------IEEE---DFCSLAIQSINQDFWIMGDVFLGRIYTEFDVGNQRLGFA 377
            |      :|.:   .|.::.|.......||:||:|:|..:|.||.|..|:|||
plant   453 IFKIGEGVESQCTSGFTAMDIAPPRGPLWILGDIFMGPYHTVFDYGKGRVGFA 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PgclNP_525030.1 pepsin_retropepsin_like 67..378 CDD:299705 133/430 (31%)
Asp 76..379 CDD:278455 130/421 (31%)
AT4G04460NP_192355.1 phytepsin 77..506 CDD:133162 133/430 (31%)
SapB_2 321..353 CDD:367521 2/31 (6%)
SapB_1 380..417 CDD:368325 0/36 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1339
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54317
OrthoDB 1 1.010 - - D1619495at2759
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR47966
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
76.890

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