DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgcl and LOC613063

DIOPT Version :9

Sequence 1:NP_525030.1 Gene:Pgcl / 30984 FlyBaseID:FBgn0011822 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_001136375.1 Gene:LOC613063 / 613063 -ID:- Length:399 Species:Xenopus tropicalis


Alignment Length:395 Identity:158/395 - (40%)
Similarity:219/395 - (55%) Gaps:32/395 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LVFLAGLIVLVGEANSTLRRIPIQKSPNFKRSH-------KNIVAERDFVQQKYNRQYTANGYPM 66
            :|.||..::..|   |.|.|||::|.|:.:.:.       |.::|..  |..||:..:..:|.|.
 Frog     8 VVLLASSLLQPG---SALIRIPLKKFPSIRHTFTEAGKDVKELLANE--VPLKYSPGFPPSGEPT 67

  Fly    67 -EHLSNYDNFQYYGNISIGTPGQDFLVQFDTGSSNLWVPGSSC--ISTACQDHQVFYKNKSSTYV 128
             |.|.||.:.||||.|.:|:|.|:|.|.|||||||||||...|  :..||..|..:..:||||||
 Frog    68 PEALKNYLDAQYYGEIGLGSPPQNFTVVFDTGSSNLWVPSVHCSMLDIACWMHHKYDSSKSSTYV 132

  Fly   129 ANGTAFSITYGTGSVSGYLSVDCVGFAGLTIQSQTFGEVTTEQGTNFVDAYFDGILGMGFPSLAV 193
            .|||||:|.|||||:|||||.|.|....|.::.|.|||...:.|..||.|.|||||||.:|.::|
 Frog   133 KNGTAFAIQYGTGSLSGYLSKDTVTIGNLAVKGQIFGEAVKQPGVTFVAAKFDGILGMAYPVISV 197

  Fly   194 DGVTPTFQNMMQQGLVQSPVFSFFLRDNGSVTFYGGELILGGSDPSLYSGSLTYVNVVQAAYWKF 258
            |||.|.|.|:|.|.||:|.:|||:|..|.. |..||||:|||:||..|:|...|::|.:.|||:.
 Frog   198 DGVPPVFDNIMAQKLVESNIFSFYLNRNPD-TQPGGELLLGGTDPKYYTGDFHYLSVTRKAYWQI 261

  Fly   259 QTDYIKVGS--TSISTFAQAIADTGTSLIIAPQAQYDQISQLFNA----NSEGLFECSST-SYPD 316
            ..|.:.||.  |......:.|.|||||||..|..:...:.:...|    ..:.:.:|... :.|.
 Frog   262 HMDQLGVGDQLTLCKGGCEVIVDTGTSLITGPLEEVTALQKAIGAVPLIQGQYMVQCDKVPTLPV 326

  Fly   317 LIININGVDFKIPAKYYIIEEED---------FCSLAIQSINQDFWIMGDVFLGRIYTEFDVGNQ 372
            :.:.:.|..:.:..:.||::...         |..|.|.......||:||||:|:.|:.||..|.
 Frog   327 ISLTLGGQVYTLTGEQYIMKVSQRGSTICLSGFMGLNIPPPAGPLWILGDVFIGQYYSVFDRAND 391

  Fly   373 RLGFA 377
            .:|||
 Frog   392 CVGFA 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PgclNP_525030.1 pepsin_retropepsin_like 67..378 CDD:299705 140/329 (43%)
Asp 76..379 CDD:278455 136/320 (43%)
LOC613063NP_001136375.1 A1_Propeptide 22..50 CDD:311771 7/27 (26%)
Cathepsin_D2 73..397 CDD:133157 138/325 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54317
OrthoDB 1 1.010 - - D1619495at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR47966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.030

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