DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgcl and Bace2

DIOPT Version :10

Sequence 1:NP_525030.1 Gene:Pgcl / 30984 FlyBaseID:FBgn0011822 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_062390.3 Gene:Bace2 / 56175 MGIID:1860440 Length:514 Species:Mus musculus


Alignment Length:429 Identity:108/429 - (25%)
Similarity:175/429 - (40%) Gaps:109/429 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 TANGYPMEHLSNYDNFQ------YYGNISIGTPGQDFLVQFDTGSSNLWVPGS--SCISTACQDH 116
            |||     .|:..||.|      ||..:.||||.|...:..||||||..|.|:  |.|.|     
Mouse    70 TAN-----FLAMVDNLQGDSGRGYYLEMLIGTPPQKVQILVDTGSSNFAVAGAPHSYIDT----- 124

  Fly   117 QVFYKNKSSTYVANGTAFSITYGTGSVSGYLSVDCV----GFAGLTIQSQTFGEVTTEQGTNFV- 176
             .|....||||.:.|...::.|..||.:|::..|.|    ||.    .|......|..:..||. 
Mouse   125 -YFDSESSSTYHSKGFDVTVKYTQGSWTGFVGEDLVTIPKGFN----SSFLVNIATIFESENFFL 184

  Fly   177 -DAYFDGILGMGFPSLA--VDGVTPTFQNMMQQGLVQSPVFSF-----FLRDNGSVTFYGGELIL 233
             ...::||||:.:.:||  ...:...|.:::.|..:.. :||.     .|...||.| .||.|:|
Mouse   185 PGIKWNGILGLAYAALAKPSSSLETFFDSLVAQAKIPD-IFSMQMCGAGLPVAGSGT-NGGSLVL 247

  Fly   234 GGSDPSLYSGSLTYVNVVQAAYWKFQTDYIKVGSTSIS------TFAQAIADTGTSLIIAPQAQY 292
            ||.:||||.|.:.|..:.:..|::.:...:::|..:::      ...:||.|:||:|:..||..:
Mouse   248 GGIEPSLYKGDIWYTPIKEEWYYQIEILKLEIGGQNLNLDCREYNADKAIVDSGTTLLRLPQKVF 312

  Fly   293 DQI------SQLFNANSEGLF-----ECSSTS------YPDLIININGVDFKIPAKYYIIEEEDF 340
            |.:      :.|....|:|.:     .|.:.|      :|.:.|.:...:.....:..|:.:   
Mouse   313 DAVVEAVARTSLIPEFSDGFWTGAQLACWTNSETPWAYFPKISIYLRDENASRSFRITILPQ--- 374

  Fly   341 CSLAIQ----------------SINQDFWIMGDVFLGRIYTEFDVGNQRLGFA------------ 377
              |.||                |.:.:..::|...:...|..||...:|:|||            
Mouse   375 --LYIQPMMGAGFNYECYRFGISSSTNALVIGATVMEGFYVVFDRAQRRVGFAVSPCAEIEGTTV 437

  Fly   378 -----PVNS---------AVGLRKAVLWRI-FTLLLACG 401
                 |.::         |..|.:.:||.: :.|:..||
Mouse   438 SEISGPFSTEDIASNCVPAQALNEPILWIVSYALMSVCG 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PgclNP_525030.1 Asp 76..379 CDD:394983 94/379 (25%)
Bace2NP_062390.3 beta_secretase_like 85..446 CDD:133140 94/377 (25%)

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