DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgcl and PGC

DIOPT Version :9

Sequence 1:NP_525030.1 Gene:Pgcl / 30984 FlyBaseID:FBgn0011822 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_002621.1 Gene:PGC / 5225 HGNCID:8890 Length:388 Species:Homo sapiens


Alignment Length:379 Identity:146/379 - (38%)
Similarity:206/379 - (54%) Gaps:42/379 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 RIPIQKSPNFKRSHKNIVAERDFVQ-QKYNRQYTANGYPMEHLS------NYDNFQYYGNISIGT 85
            ::|::|..:.:.:.|......:|:: .||:..:.   |....||      .|.:..|:|.|||||
Human    20 KVPLKKFKSIRETMKEKGLLGEFLRTHKYDPAWK---YRFGDLSVTYEPMAYMDAAYFGEISIGT 81

  Fly    86 PGQDFLVQFDTGSSNLWVPGSSCISTACQDHQVFYKNKSSTYVANGTAFSITYGTGSVSGYLSVD 150
            |.|:|||.|||||||||||...|.|.||..|..|..::||||..||..||:.||:||::|:...|
Human    82 PPQNFLVLFDTGSSNLWVPSVYCQSQACTSHSRFNPSESSTYSTNGQTFSLQYGSGSLTGFFGYD 146

  Fly   151 CVGFAGLTIQSQTFGEVTTEQGTNFVDAYFDGILGMGFPSLAVDGVTPTFQNMMQQGLVQSPVFS 215
            .:....:.:.:|.||....|.|||||.|.||||:|:.:|:|:||..|...|.|:|:|.:.|||||
Human   147 TLTVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPALSVDEATTAMQGMVQEGALTSPVFS 211

  Fly   216 FFL-RDNGSVTFYGGELILGGSDPSLYSGSLTYVNVVQAAYWKFQTDYIKVGSTS---ISTFAQA 276
            .:| ...||   .||.::.||.|.|||:|.:.:..|.|..||:...:...:|..:   .|...||
Human   212 VYLSNQQGS---SGGAVVFGGVDSSLYTGQIYWAPVTQELYWQIGIEEFLIGGQASGWCSEGCQA 273

  Fly   277 IADTGTSLIIAPQ-----------AQYDQISQ-LFNANSEGLFECSSTSYPDLIININGVDFKIP 329
            |.||||||:..||           ||.|:..| |.|.|       |..:.|.|...||||:|.:|
Human   274 IVDTGTSLLTVPQQYMSALLQATGAQEDEYGQFLVNCN-------SIQNLPSLTFIINGVEFPLP 331

  Fly   330 AKYYIIEEEDFCSLAIQSI------NQDFWIMGDVFLGRIYTEFDVGNQRLGFA 377
            ...||:....:|::.::..      .|..||:|||||...|:.:|:||.|:|||
Human   332 PSSYILSNNGYCTVGVEPTYLSSQNGQPLWILGDVFLRSYYSVYDLGNNRVGFA 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PgclNP_525030.1 pepsin_retropepsin_like 67..378 CDD:299705 139/339 (41%)
Asp 76..379 CDD:278455 136/324 (42%)
PGCNP_002621.1 A1_Propeptide 18..46 CDD:285240 4/25 (16%)
gastricsin 70..387 CDD:133144 136/326 (42%)
Asp 72..387 CDD:278455 136/324 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 297 1.000 Domainoid score I1463
eggNOG 1 0.900 - - E1_KOG1339
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 319 1.000 Inparanoid score I2536
Isobase 1 0.950 - 0 Normalized mean entropy S1195
OMA 1 1.010 - - QHG54317
OrthoDB 1 1.010 - - D1619495at2759
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1456
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
109.830

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